RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA951412", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA951412 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29520266 29520266 PRJNA951412_P_NODE_4370_length_252_cov_0.865922_g4285_i0 PRJNA951412 4370 252 0.865922 2.18212344 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 58.5 1.15e-7   NR CAF0778184.1 104777 g4285 i0 46.6 1.04761904761905 88 36 92.9 4 2 235 1710 1796 CAF0778184.1 unnamed protein product [Brachionus calyciflorus] diamond 264 58.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
29874267 29874267 PRJNA951412_P_NODE_2811_length_288_cov_1.218605_g2726_i0 PRJNA951412 2811 288 1.218605 3.5095824 Rotifera 10190 Rotifera other_Eukaryota 65.9 3.28e-10   NR CAF1201746.1 392033 g2726 i0 40.8 1.83333333333333 98 51 96.9 4 3 281 14 109 CAF1201746.1 unnamed protein product [Rotaria sordida] diamond 528 65.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
31005093 31005093 PRJNA951412_P_NODE_2194_length_316_cov_1.275720_g2109_i0 PRJNA951412 2194 316 1.27572 4.0312752 Adineta ricciae 249248 Rotifera other_Eukaryota 49.7 3.22e-4   NR CAF0867574.1 249248 g2109 i0 34.3 4.68037974683544 99 57 92.1 3 292 2 544 636 CAF0867574.1 unnamed protein product [Adineta ricciae] diamond 1479 49.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;