RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA951412", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA951412 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28958734 28958734 PRJNA951412_P_NODE_2608_length_296_cov_1.394619_g2523_i0 PRJNA951412 2608 296 1.394619 4.12807224 Metazoa 33208 Porifera other_Eukaryota 94.7 3.82e-20   NR XP_064397256.1 6063 g2523 i0 47.4 23.3716216216216 97 45 98.3 1 294 4 70 160 XP_064397256.1 protein O-mannosyl-transferase TMTC3-like [Halichondria panicea] diamond 6918 95.1 0.995793901156677 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
32080276 32080276 PRJNA951412_P_NODE_818_length_506_cov_1.588915_g733_i0 PRJNA951412 818 506 1.588915 8.0399099 Oscarella lobularis 121494 Porifera other_Eukaryota 168 7.65e-47   NR XP_065833127.1 121494 g733 i0 60.7 8.1403162055336 117 46 69.4 0 2 352 308 424 XP_065833127.1 cathepsin L-like [Oscarella lobularis] diamond 4119 168 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;