RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA951412", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA951412 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8587760 8587760 PRJNA951412_P_NODE_307_length_887_cov_12.667076_g233_i0 PRJNA951412 307 887 12.667076 112.35696412 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 129 5.94e-32   NR TEB19254.1 2494336 g233 i0 33.7 0.90304396843292 267 155 84.2 8 43 789 1 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 801 129 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
8587786 8587786 PRJNA951412_P_NODE_507_length_670_cov_1.968174_g423_i0 PRJNA951412 507 670 1.968174 13.1867658 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 156 5.21e-45   NR KAF4712660.1 32597 g423 i0 70.3 6.25074626865672 101 30 45.2 0 668 366 16 116 KAF4712660.1 iso-1-cytochrome c [Perkinsus olseni] diamond 4188 156 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28131227 28131227 PRJNA951412_P_NODE_225_length_1015_cov_9.428875_g161_i0 PRJNA951412 225 1015 9.428875 95.70308125 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 174 8.76e-49   NR TEB19254.1 2494336 g161 i0 42.4 0.780295566502463 264 140 75.4 4 962 198 3 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 792 174 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
30531035 30531035 PRJNA951412_P_NODE_1833_length_338_cov_2.332075_g1748_i0 PRJNA951412 1833 338 2.332075 7.8824135 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 48.9 6.03e-4   NR TEB19254.1 2494336 g1748 i0 35.5 0.976331360946746 110 62 89.6 3 305 3 3 112 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 330 48.9 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;