RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA951412", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA951412 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22940545 22940545 PRJNA951412_P_NODE_5538_length_248_cov_0.891429_g5453_i0 PRJNA951412 5538 248 0.891429 2.21074392 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|156100724|ref|XM_001616006.1| 5855 g5453 i0 96.97 6.36290322580645 33 0 13 1 199 231 221 190 Plasmodium vivax hypothetical protein, conserved (PVX_113320), partial mRNA blastn 1578 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax
26899114 26899114 PRJNA951412_P_NODE_3421_length_268_cov_1.594872_g3336_i0 PRJNA951412 3421 268 1.594872 4.27425696 Hepatozoon canis 110120 SAR_Eukaryotes SAR_Eukaryotes 62 7.43e-9   NR QBH61301.1 110120 g3336 i0 39.3 0.996268656716418 89 51 98.5 2 266 3 39 125 QBH61301.1 cytochrome B-1 [Hepatozoon canis] diamond 267 62 1 Eukaryota Sar   Apicomplexa     Hepatozoidae Hepatozoon Hepatozoon canis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;