contig_metadata
11 rows where bioproject = "PRJNA951412" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10191521 | 10191521 | PRJNA951412_P_NODE_6208_length_246_cov_0.901734_g6123_i0 | PRJNA951412 | 6208 | 246 | 0.901734 | 2.21826564 | Botrimarina | 2795782 | Bacteria | Bacteria | 285 | 2.01e-72 | NTclustered | gi|1712768844|gb|CP036350.1| | 2527962 | g6123 | i0 | 88.235 | 2.05691056910569 | 238 | 28 | 97 | 0 | 1 | 238 | 2133335 | 2133572 | Planctomycetes bacterium K2D chromosome, complete genome | blastn | 506 | 285 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetes bacterium K2D | |||||
| 11138431 | 11138431 | PRJNA951412_P_NODE_2209_length_315_cov_1.115702_g2124_i0 | PRJNA951412 | 2209 | 315 | 1.115702 | 3.5144613 | Roseimicrobium sp. ORNL1 | 2711231 | Bacteria | Bacteria | 58.4 | 6.34e-4 | NTclustered | gi|1815841271|gb|CP049143.1| | 2711231 | g2124 | i0 | 100 | 3.01269841269841 | 31 | 0 | 10 | 0 | 58 | 88 | 2594584 | 2594554 | Roseimicrobium sp. ORNL1 chromosome, complete genome | blastn | 949 | 58.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. ORNL1 | |
| 16237627 | 16237627 | PRJNA951412_P_NODE_3813_length_258_cov_1.254054_g3728_i0 | PRJNA951412 | 3813 | 258 | 1.254054 | 3.23545932 | Neorhodopirellula lusitana | 445327 | Bacteria | Bacteria | 134 | 4.49e-36 | NR | WP_404308400.1 | 445327 | g3728 | i0 | 70.6 | 2.98837209302326 | 85 | 24 | 97.7 | 1 | 3 | 254 | 115 | 199 | WP_404308400.1 NADPH-dependent aldehyde reductase Ahr [Neorhodopirellula lusitana] | diamond | 771 | 134 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Neorhodopirellula | Neorhodopirellula lusitana | |
| 18786569 | 18786569 | PRJNA951412_P_NODE_5975_length_247_cov_0.890805_g5890_i0 | PRJNA951412 | 5975 | 247 | 0.890805 | 2.20028835 | Terrimicrobiaceae bacterium | 2832348 | Bacteria | Bacteria | 97.4 | 2.09e-21 | NR | MDD5199418.1 | 2832348 | g5890 | i0 | 75.4 | 1.62753036437247 | 65 | 16 | 78.9 | 0 | 51 | 245 | 56 | 120 | MDD5199418.1 M48 family metallopeptidase [Terrimicrobiaceae bacterium] | diamond | 402 | 97.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Terrimicrobiia | Terrimicrobiales | Terrimicrobiaceae | Terrimicrobiaceae bacterium | ||
| 18786577 | 18786577 | PRJNA951412_P_NODE_6695_length_245_cov_0.906977_g6610_i0 | PRJNA951412 | 6695 | 245 | 0.906977 | 2.22209365 | Verrucomicrobiaceae | 203557 | Bacteria | Bacteria | 145 | 2.14e-38 | NR | WP_200269199.1 | 454153 | g6610 | i0 | 90.1 | 12.869387755102 | 81 | 8 | 99.2 | 0 | 243 | 1 | 715 | 795 | WP_200269199.1 proline dehydrogenase family protein [Luteolibacter pohnpeiensis] | diamond | 3153 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter pohnpeiensis | |
| 25160949 | 25160949 | PRJNA951412_P_NODE_4780_length_250_cov_1.480226_g4695_i0 | PRJNA951412 | 4780 | 250 | 1.480226 | 3.700565 | uncultured Terrimicrobium sp. | 1758082 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2518609723|gb|OR128325.1| | 1758082 | g4695 | i0 | 100 | 99.888 | 250 | 0 | 100 | 0 | 1 | 250 | 290 | 41 | Uncultured Terrimicrobium sp. clone 748a464ea190c92309074b4379e01e2e 16S ribosomal RNA gene, partial sequence | blastn | 24972 | 462 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Terrimicrobiia | Terrimicrobiales | Terrimicrobiaceae | Terrimicrobium | uncultured Terrimicrobium sp. | |
| 26708720 | 26708720 | PRJNA951412_P_NODE_7601_length_243_cov_0.905882_g7516_i0 | PRJNA951412 | 7601 | 243 | 0.905882 | 2.20129326 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 126 | 3.6899999999999996e-32 | NR | MCA8985066.1 | 2026779 | g7516 | i0 | 100 | 0.703703703703704 | 57 | 0 | 70.4 | 0 | 3 | 173 | 414 | 470 | MCA8985066.1 methyltransferase domain-containing protein [Planctomycetaceae bacterium] | diamond | 171 | 126 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 26835851 | 26835851 | PRJNA951412_P_NODE_7701_length_242_cov_0.923077_g7616_i0 | PRJNA951412 | 7701 | 242 | 0.923077 | 2.23384634 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 82 | 2.16e-16 | NR | MBX7106043.1 | 2052164 | g7616 | i0 | 51.3 | 0.991735537190083 | 80 | 37 | 99.2 | 1 | 3 | 242 | 185 | 262 | MBX7106043.1 HNH endonuclease [Gemmataceae bacterium] | diamond | 240 | 82 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 29520264 | 29520264 | PRJNA951412_P_NODE_2090_length_323_cov_1.116000_g2005_i0 | PRJNA951412 | 2090 | 323 | 1.116 | 3.60468 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 124 | 3.0299999999999997e-30 | NR | MEC9373988.1 | 2026780 | g2005 | i0 | 57.7 | 6.52941176470588 | 104 | 44 | 96.6 | 0 | 10 | 321 | 657 | 760 | MEC9373988.1 alanine--tRNA ligase [Planctomycetota bacterium] | diamond | 2109 | 124 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32340229 | 32340229 | PRJNA951412_P_NODE_5579_length_248_cov_0.891429_g5494_i0 | PRJNA951412 | 5579 | 248 | 0.891429 | 2.21074392 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 126 | 6.52e-33 | NR | MFO0847386.1 | 2052164 | g5494 | i0 | 69.5 | 1.98387096774194 | 82 | 25 | 99.2 | 0 | 1 | 246 | 165 | 246 | MFO0847386.1 fatty acid desaturase [Gemmataceae bacterium] | diamond | 492 | 127 | 0.992125984251969 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 32365286 | 32365286 | PRJNA951412_P_NODE_6479_length_246_cov_0.890173_g6394_i0 | PRJNA951412 | 6479 | 246 | 0.890173 | 2.18982558 | Isosphaeraceae bacterium | 2691532 | Bacteria | Bacteria | 52.8 | 1.09e-5 | NR | HEV3164829.1 | 2691532 | g6394 | i0 | 39.3 | 1.02439024390244 | 84 | 46 | 98.8 | 2 | 2 | 244 | 330 | 411 | HEV3164829.1 hypothetical protein [Isosphaeraceae bacterium] | diamond | 252 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;