RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA951412", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA951412 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28857103 28857103 PRJNA951412_P_NODE_7308_length_243_cov_1.811765_g7223_i0 PRJNA951412 7308 243 1.811765 4.40258895 Ridgeia piscesae 27915 Annelida Annelida 92.8 1.62e-21   NR KAK2183687.1 27915 g7223 i0 66.7 0.777777777777778 63 21 77.8 0 242 54 93 155 KAK2183687.1 hypothetical protein NP493_300g03060 [Ridgeia piscesae] diamond 189 92.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
29362539 29362539 PRJNA951412_P_NODE_6189_length_246_cov_0.901734_g6104_i0 PRJNA951412 6189 246 0.901734 2.21826564 Paralvinella palmiformis 53620 Annelida Annelida 75.9 5.9e-14   NR KAK2151706.1 53620 g6104 i0 46.4 2.80487804878049 84 42 98.8 1 245 3 226 309 KAK2151706.1 hypothetical protein LSH36_354g03044 [Paralvinella palmiformis] diamond 690 75.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
32206938 32206938 PRJNA951412_P_NODE_3678_length_261_cov_1.654255_g3593_i0 PRJNA951412 3678 261 1.654255 4.31760555 Owenia fusiformis 6347 Annelida Annelida 82.4 8.18e-18   NR CAH1790108.1 6347 g3593 i0 48.4 1.04597701149425 91 40 98.9 3 3 260 39 127 CAH1790108.1 unnamed protein product [Owenia fusiformis] diamond 273 82.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;