RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA951412", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 5 ✖

tax_phylum 1

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA951412 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8587743 8587743 PRJNA951412_P_NODE_1267_length_398_cov_2.209231_g1182_i0 PRJNA951412 1267 398 2.209231 8.79273938 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 221 4.99e-69   NR KAJ5068868.1 1746090 g1182 i0 72.7 1.98994974874372 132 35 99.5 1 2 397 139 269 KAJ5068868.1 gdp-mannose 35-epimerase [Anaeramoeba ignava] diamond 792 221 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
26803975 26803975 PRJNA951412_P_NODE_6861_length_245_cov_0.895349_g6776_i0 PRJNA951412 6861 245 0.895349 2.19360505 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 87 9.33e-18   NR KAJ6249989.1 1746091 g6776 i0 57.1 0.857142857142857 70 27 82 1 41 241 16 85 KAJ6249989.1 alpha-aminoadipic semialdehyde dehydrogenase [Anaeramoeba flamelloides] diamond 210 87 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
27405042 27405042 PRJNA951412_P_NODE_8203_length_228_cov_2.238710_g8118_i0 PRJNA951412 8203 228 2.23871 5.1042588 Streblomastix strix 222440 Preaxostyla other_Eukaryota 63.9 1.71e-10   NR KAA6388004.1 222440 g8118 i0 64.3 0.552631578947368 42 15 55.3 0 228 103 125 166 KAA6388004.1 MAG: putative Translationally-controlled tumor protein [Streblomastix strix] diamond 126 63.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
31226129 31226129 PRJNA951412_P_NODE_715_length_542_cov_2.494670_g630_i0 PRJNA951412 715 542 2.49467 13.5211114 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 59.3 9.11e-7   NR KAJ5073268.1 1746090 g630 i0 60.9 0.487084870848708 46 16 25.5 1 540 403 269 312 KAJ5073268.1 substrate carrier family protein a [Anaeramoeba ignava] diamond 264 59.3 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
31542635 31542635 PRJNA951412_P_NODE_456_length_716_cov_3.037325_g374_i0 PRJNA951412 456 716 3.037325 21.747247 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 154 1.78e-41   NR KAJ5069796.1 1746090 g374 i0 50 0.636871508379888 152 73 62.8 2 64 513 138 288 KAJ5069796.1 ribosomal protein L5-RELATED [Anaeramoeba ignava] diamond 456 154 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;