RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA951412", tax_clade = "Luna-1 subcluster" and tax_phylum = "Actinomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Actinomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 2 ✖

bioproject 1

  • PRJNA951412 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27373566 27373566 PRJNA951412_P_NODE_4963_length_250_cov_0.875706_g4878_i0 PRJNA951412 4963 250 0.875706 2.189265 Aquiluna sp. 2053504 Bacteria Bacteria 142 1.25e-40   NR MDP4756602.1 2053504 g4878 i0 77.1 1.992 83 19 99.6 0 2 250 39 121 MDP4756602.1 glycogen debranching enzyme [Aquiluna sp.] diamond 498 142 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna sp.
31257853 31257853 PRJNA951412_P_NODE_5635_length_248_cov_0.885714_g5550_i0 PRJNA951412 5635 248 0.885714 2.19657072 Aquiluna sp. 2053504 Bacteria Bacteria 88.6 2.34e-20   NR MDP4756715.1 2053504 g5550 i0 88.2 0.616935483870968 51 6 61.7 0 155 3 2 52 MDP4756715.1 DUF3566 domain-containing protein [Aquiluna sp.] diamond 153 88.6 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;