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contig_metadata

12 rows where bioproject = "PRJNA951412" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA951412 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13688492 13688492 PRJNA951412_P_NODE_691_length_549_cov_1.920168_g606_i0 PRJNA951412 691 549 1.920168 10.54172232 root 1 Root_unresolved Root_unresolved 302 3.0399999999999996e-99   NR ADK90072.1 438413 g606 i0 79.6 10.9289617486339 181 37 98.9 0 548 6 64 244 ADK90072.1 elongation factor 1 alpha, partial [Corallomyxa tenera] diamond 6000 302 1 Eukaryota Amoebozoa           Corallomyxa Corallomyxa tenera
14962634 14962634 PRJNA951412_P_NODE_2452_length_303_cov_1.660870_g2367_i0 PRJNA951412 2452 303 1.66087 5.0324361 Telaepolella tubasferens 1346289 Evosea other_Eukaryota 233 9.39e-57   NTclustered gi|167859713|gb|EU273436.1| 1346289 g2367 i0 80.667 74.7491749174917 300 58 99 0 4 303 671 372 Telaepolella tubasferens clone 2 actin gene, partial cds blastn 22649 233 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Telaepolella Telaepolella tubasferens
22611812 22611812 PRJNA951412_P_NODE_338_length_844_cov_2.184176_g261_i0 PRJNA951412 338 844 2.184176 18.43444544 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 387 2.85e-131   NR KYQ94315.1 361077 g261 i0 77.5 0.867298578199052 244 55 86.7 0 733 2 5 248 KYQ94315.1 S-adenosylmethionine synthetase [Tieghemostelium lacteum] diamond 732 387 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
27562485 27562485 PRJNA951412_P_NODE_7884_length_242_cov_0.917160_g7799_i0 PRJNA951412 7884 242 0.91716 2.2195272 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 117 1.99e-28   NR KAH3746252.1 1580589 g7799 i0 67.9 1.93388429752066 78 25 96.7 0 238 5 449 526 KAH3746252.1 Adaptor protein complex AP-2 alpha subunit [Pelomyxa schiedti] diamond 468 117 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28194017 28194017 PRJNA951412_P_NODE_6106_length_247_cov_0.885057_g6021_i0 PRJNA951412 6106 247 0.885057 2.18609079 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 48.5 3.54e-4   NR PRP89471.1 1890364 g6021 i0 40.7 0.65587044534413 54 32 65.6 0 211 50 320 373 PRP89471.1 hypothetical protein PROFUN_01334 [Planoprotostelium fungivorum] diamond 162 48.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28358504 28358504 PRJNA951412_P_NODE_8106_length_236_cov_2.245399_g8021_i0 PRJNA951412 8106 236 2.245399 5.29914164 root 1 Root_unresolved Root_unresolved 42 0.0446   NR XP_643741.1 352472 g8021 i0 48.8 1.14406779661017 43 20 54.7 1 6 134 118 158 XP_643741.1 hypothetical protein DDB_G0275119 [Dictyostelium discoideum AX4] diamond 270 42 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
28509993 28509993 PRJNA951412_P_NODE_4407_length_252_cov_0.865922_g4322_i0 PRJNA951412 4407 252 0.865922 2.18212344 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 47.4 9.57e-4   NR KAH3758330.1 1580589 g4322 i0 41.9 2.41666666666667 74 37 86.9 3 30 248 73 141 KAH3758330.1 hypothetical protein Pelo_9868 [Pelomyxa schiedti] diamond 609 47.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28731024 28731024 PRJNA951412_P_NODE_5867_length_247_cov_0.896552_g5782_i0 PRJNA951412 5867 247 0.896552 2.21448344 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 82.4 4.26e-16   NR XP_004334260.1 1257118 g5782 i0 49.3 3.66801619433198 73 37 88.7 0 2 220 427 499 XP_004334260.1 protein kinase, putative [Acanthamoeba castellanii str. Neff] diamond 906 82.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29962462 29962462 PRJNA951412_P_NODE_4231_length_252_cov_0.871508_g4146_i0 PRJNA951412 4231 252 0.871508 2.19620016 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 81.3 1.05e-15   NR XP_012750578.1 1410327 g4146 i0 46.6 3.42857142857143 73 39 86.9 0 26 244 402 474 XP_012750578.1 hypothetical protein SAMD00019534_096570 [Acytostelium subglobosum LB1] diamond 864 81.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
30720611 30720611 PRJNA951412_P_NODE_6934_length_244_cov_1.754386_g6849_i0 PRJNA951412 6934 244 1.754386 4.28070184 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 107 6.78e-25   NR PRP89409.1 1890364 g6849 i0 65.8 1.95491803278689 79 27 97.1 0 5 241 201 279 PRP89409.1 hypothetical protein PROFUN_01272 [Planoprotostelium fungivorum] diamond 477 107 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32048680 32048680 PRJNA951412_P_NODE_1718_length_347_cov_1.901460_g1633_i0 PRJNA951412 1718 347 1.90146 6.5980662 Dictyostelium purpureum 5786 Evosea other_Eukaryota 127 1.23e-33   NR XP_003295033.1 5786 g1633 i0 58.6 1.7463976945245 99 40 84.7 1 295 2 2 100 XP_003295033.1 uncharacterized protein DICPUDRAFT_51857 [Dictyostelium purpureum] diamond 606 127 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32206937 32206937 PRJNA951412_P_NODE_1558_length_361_cov_1.350694_g1473_i0 PRJNA951412 1558 361 1.350694 4.87600534 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 99.4 1.8199999999999994e-23   NR KYQ92788.1 361077 g1473 i0 47.1 0.864265927977839 104 44 78.1 3 283 2 21 123 KYQ92788.1 lysozyme [Tieghemostelium lacteum] diamond 312 99.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;