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contig_metadata

22 rows where bioproject = "PRJNA951388" and tax_superkingdom = "Viruses"

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tax_kingdom 3

analysis 2

tax_superkingdom 1

  • Viruses · 22 ✖

bioproject 1

  • PRJNA951388 · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
934786 934786 PRJNA951388_S_NODE_8021_length_298_cov_5.871111_g7894_i0 PRJNA951388 8021 298 5.871111 17.49591078 Bromovirus BMV 3427622 Viruses Viruses 551 2.239999999999999e-152   NTclustered gi|2329659869|gb|OK558648.1| 12302 g7894 i0 100 37.8959731543624 298 0 100 0 1 298 817 1114 Brome mosaic virus isolate VRS-315 ORF1 and ORF2 genes, complete cds blastn 11293 551 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV
6037873 6037873 PRJNA951388_S_NODE_10785_length_250_cov_1.096045_g10658_i0 PRJNA951388 10785 250 1.096045 2.7401125 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.002   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g10658 i0 100 0.232 30 0 12 0 1 30 13 42 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
6037888 6037888 PRJNA951388_S_NODE_3765_length_415_cov_18.944444_g3638_i0 PRJNA951388 3765 415 18.944444 78.6194426 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.011   NTclustered gi|2309594316|gb|OP536747.1| 10244 g3638 i0 100 6.98795180722892 29 0 7 0 74 102 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
9862750 9862750 PRJNA951388_S_NODE_2608_length_471_cov_33.608040_g2481_i0 PRJNA951388 2608 471 33.60804 158.2938684 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.013   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g2481 i0 100 0.121019108280255 29 0 6 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
9862760 9862760 PRJNA951388_S_NODE_4128_length_403_cov_11.709091_g4001_i0 PRJNA951388 4128 403 11.709091 47.18763673 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 8.31e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g4001 i0 100 0.387096774193548 31 0 8 0 1 31 13 43 Carnation latent virus isolate KL, complete genome blastn 156 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
12413830 12413830 PRJNA951388_S_NODE_11870_length_233_cov_4.756250_g11743_i0 PRJNA951388 11870 233 4.75625 11.0820625 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.006   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g11743 i0 100 0.244635193133047 29 0 12 0 205 233 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
12413840 12413840 PRJNA951388_S_NODE_2850_length_458_cov_8.706494_g2723_i0 PRJNA951388 2850 458 8.706494 39.87574252 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.003   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g2723 i0 94.444 0.262008733624454 36 2 8 0 423 458 91 56 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 120 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
13688405 13688405 PRJNA951388_S_NODE_5131_length_370_cov_7.404040_g5004_i0 PRJNA951388 5131 370 7.40404 27.394948 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.01   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g5004 i0 100 0.154054054054054 29 0 8 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
18786506 18786506 PRJNA951388_S_NODE_955_length_662_cov_4.198642_g840_i0 PRJNA951388 955 662 4.198642 27.79501004 Jujube closterovirus 1 3043313 Viruses Viruses 60.2 3.94e-4   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g840 i0 100 0.0483383685800604 32 0 5 0 631 662 37 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 32 60.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
20061395 20061395 PRJNA951388_S_NODE_13076_length_204_cov_6.290076_g12949_i0 PRJNA951388 13076 204 6.290076 12.831755039999999 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 56.5 0.001   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g12949 i0 100 0.563725490196078 30 0 15 0 175 204 85 56 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 115 56.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
20061397 20061397 PRJNA951388_S_NODE_1616_length_550_cov_27.492662_g1495_i0 PRJNA951388 1616 550 27.492662 151.209641 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.015   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g1495 i0 100 0.0527272727272727 29 0 5 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
21336816 21336816 PRJNA951388_S_NODE_177_length_1186_cov_114.204852_g116_i0 PRJNA951388 177 1186 114.204852 1354.46954472 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.034   NTclustered gi|1995060321|gb|MN450069.1| 12164 g116 i0 100 0.0244519392917369 29 0 2 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
27468126 27468126 PRJNA951388_S_NODE_383_length_894_cov_3.880633_g292_i0 PRJNA951388 383 894 3.880633 34.69285902 Zebrafish jaw picornavirus RQ13 Viruses Viruses 75.5 5.22e-11   NR XEQ84337.1 RQ13 g292 i0 30.4 1.69127516778523 168 104 52 3 92 556 288 455 XEQ84337.1 polyprotein, partial [Mink kobuvirus] diamond 1512 75.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Kobuvirus Zebrafish jaw picornavirus
27632479 27632479 PRJNA951388_S_NODE_684_length_743_cov_4.432836_g574_i0 PRJNA951388 684 743 4.432836 32.93597148 Zebrafish jaw picornavirus RQ13 Viruses Viruses 271 4.46e-86   NR ADI48258.1 RQ13 g574 i0 55.2 2.95154777927322 239 101 96.5 4 719 3 1 233 ADI48258.1 3D, partial [Bat kobuvirus TM003k] diamond 2193 272 0.996323529411765 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Kobuvirus Zebrafish jaw picornavirus
28446993 28446993 PRJNA951388_S_NODE_426_length_863_cov_12.545570_g330_i0 PRJNA951388 426 863 12.54557 108.2682691 Gammaretrovirus murleu 3428959 Viruses Viruses 582 2.9499999999999996e-206   NR 8WUS_E 11801 g330 i0 99 8.97914252607184 287 3 99.8 0 3 863 31 317 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 7749 582 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
28958732 28958732 PRJNA951388_S_NODE_808_length_705_cov_4.901899_g695_i0 PRJNA951388 808 705 4.901899 34.55838795 Zebrafish jaw picornavirus RQ13 Viruses Viruses 59.3 4.47e-6   NR XOL43542.1 RQ13 g695 i0 29 3.05957446808511 183 98 65.1 7 574 116 950 1130 XOL43542.1 polyprotein [Kobuvirus dekago] diamond 2157 59.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Kobuvirus Zebrafish jaw picornavirus
29772734 29772734 PRJNA951388_S_NODE_931_length_668_cov_134.105882_g816_i0 PRJNA951388 931 668 134.105882 895.82729176 Zebrafish jaw picornavirus RQ13 Viruses Viruses 77 3.34e-12   NR QJX58422.1 RQ13 g816 i0 43.8 3.01796407185629 96 52 42.2 2 4 285 2264 2359 QJX58422.1 polyprotein [Salivirus A] diamond 2016 77 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Salivirus Zebrafish jaw picornavirus
30562441 30562441 PRJNA951388_S_NODE_6753_length_327_cov_1.862205_g6626_i0 PRJNA951388 6753 327 1.862205 6.08941035 Human immunodeficiency virus 1 11676 Viruses Viruses 48.9 6.4e-4   NR WAJ62392.1 11676 g6626 i0 35.4 3.00917431192661 82 43 75.2 1 44 289 330 401 WAJ62392.1 gag protein, partial [Human immunodeficiency virus 1] diamond 984 48.9 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Lentivirus Lentivirus humimdef1
30568974 30568974 PRJNA951388_S_NODE_5393_length_363_cov_1.593103_g5266_i0 PRJNA951388 5393 363 1.593103 5.78296389 Zebrafish jaw picornavirus RQ13 Viruses Viruses 114 9.06e-27   NR YP_010796386.1 RQ13 g5266 i0 51.9 4.43801652892562 108 52 89.3 0 326 3 1354 1461 YP_010796386.1 polyprotein [tropivirus A1] diamond 1611 115 0.991304347826087 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Tropivirus Zebrafish jaw picornavirus
31257850 31257850 PRJNA951388_S_NODE_615_length_774_cov_11.880171_g507_i0 PRJNA951388 615 774 11.880171 91.95252354 Moloney murine leukemia virus 11801 Viruses Viruses 493 4.71e-159   NR NP_057933.2 11801 g507 i0 97.3 1 258 7 100 0 1 774 1076 1333 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 774 493 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31637328 31637328 PRJNA951388_S_NODE_7096_length_319_cov_3.621951_g6969_i0 PRJNA951388 7096 319 3.621951 11.55402369 Zebrafish jaw picornavirus RQ13 Viruses Viruses 137 7.48e-35   NR QUS52515.1 RQ13 g6969 i0 61.2 1.93730407523511 103 40 96.9 0 6 314 2223 2325 QUS52515.1 polyprotein [ludopivirus A1] diamond 618 137 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Ludopivirus Zebrafish jaw picornavirus
32750464 32750464 PRJNA951388_S_NODE_10140_length_259_cov_5.161290_g10013_i0 PRJNA951388 10140 259 5.16129 13.3677411 Mitoviridae 2732892 Viruses Viruses 93.6 5.99e-20   NR YP_010799405.1 2497445 g10013 i0 50 4.06563706563707 92 40 99.6 1 259 2 125 216 YP_010799405.1 RNA-dependent RNA polymerase [Nigrospora oryzae mitovirus 2] diamond 1053 94.4 0.991525423728813 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Unuamitovirus Unuamitovirus nior2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;