contig_metadata
22 rows where bioproject = "PRJNA951388" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3814793 | 3814793 | PRJNA951388_S_NODE_10503_length_254_cov_2.232044_g10376_i0 | PRJNA951388 | 10503 | 254 | 2.232044 | 5.66939176 | Paenibacillus | 44249 | Bacteria | Bacteria | 451 | 1.95e-122 | NTclustered | gi|2700521045|gb|CP147845.1| | 59843 | g10376 | i0 | 98.819 | 4.97637795275591 | 254 | 2 | 100 | 1 | 1 | 254 | 3891529 | 3891781 | Paenibacillus glucanolyticus strain GlSt238 chromosome, complete genome | blastn | 1264 | 451 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus glucanolyticus | ||
| 5091099 | 5091099 | PRJNA951388_S_NODE_6004_length_346_cov_1.974359_g5877_i0 | PRJNA951388 | 6004 | 346 | 1.974359 | 6.83128214 | Paenibacillus | 44249 | Bacteria | Bacteria | 623 | 5.529999999999999e-174 | NTclustered | gi|2700521045|gb|CP147845.1| | 59843 | g5877 | i0 | 99.133 | 5 | 346 | 3 | 100 | 0 | 1 | 346 | 1480794 | 1481139 | Paenibacillus glucanolyticus strain GlSt238 chromosome, complete genome | blastn | 1730 | 623 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus glucanolyticus | ||
| 6037878 | 6037878 | PRJNA951388_S_NODE_11765_length_235_cov_3.783951_g11638_i0 | PRJNA951388 | 11765 | 235 | 3.783951 | 8.89228485 | Staphylococcus cohnii | 29382 | Bacteria | Bacteria | 435 | 1.79e-117 | NTclustered | gi|1373834432|emb|LT963440.1| | 29382 | g11638 | i0 | 100 | 99.2255319148936 | 235 | 0 | 100 | 0 | 1 | 235 | 538828 | 538594 | Staphylococcus cohnii isolate Staphylococcus cohnii ATCC 29974 genome assembly, chromosome: I | blastn | 23318 | 435 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus cohnii | ||
| 6366800 | 6366800 | PRJNA951388_S_NODE_10925_length_248_cov_1.245714_g10798_i0 | PRJNA951388 | 10925 | 248 | 1.245714 | 3.08937072 | Bacillales | 1385 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2692800537|gb|CP146065.1| | 1283 | g10798 | i0 | 100 | 471.778225806452 | 248 | 0 | 100 | 0 | 1 | 248 | 771518 | 771765 | Staphylococcus haemolyticus strain SPS12 chromosome, complete genome | blastn | 117001 | 459 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus haemolyticus | ||
| 11138416 | 11138416 | PRJNA951388_S_NODE_9969_length_262_cov_1.201058_g9842_i0 | PRJNA951388 | 9969 | 262 | 1.201058 | 3.14677196 | Paenibacillus glucanolyticus | 59843 | Bacteria | Bacteria | 484 | 1.99e-132 | NTclustered | gi|2700521045|gb|CP147845.1| | 59843 | g9842 | i0 | 100 | 5 | 262 | 0 | 100 | 0 | 1 | 262 | 3900129 | 3900390 | Paenibacillus glucanolyticus strain GlSt238 chromosome, complete genome | blastn | 1310 | 484 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus glucanolyticus | ||
| 12413860 | 12413860 | PRJNA951388_S_NODE_7950_length_300_cov_1.356828_g7823_i0 | PRJNA951388 | 7950 | 300 | 1.356828 | 4.070484 | Dolosigranulum pigrum | 29394 | Bacteria | Bacteria | 555 | 1.7399999999999995e-153 | NTclustered | gi|2020672664|gb|CP040417.1| | 29394 | g7823 | i0 | 100 | 25 | 300 | 0 | 100 | 0 | 1 | 300 | 1749628 | 1749329 | Dolosigranulum pigrum strain KPL3077 chromosome | blastn | 7500 | 555 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Carnobacteriaceae | Dolosigranulum | Dolosigranulum pigrum | ||
| 12413866 | 12413866 | PRJNA951388_S_NODE_9710_length_266_cov_1.797927_g9583_i0 | PRJNA951388 | 9710 | 266 | 1.797927 | 4.78248582 | Faecalibacterium prausnitzii | 853 | Bacteria | Bacteria | 486 | 5.629999999999999e-133 | NTclustered | gi|2094528057|gb|CP065376.1| | 853 | g9583 | i0 | 99.624 | 374.65037593985 | 266 | 1 | 100 | 0 | 1 | 266 | 1907144 | 1907409 | Faecalibacterium prausnitzii strain Fp360 chromosome, complete genome | blastn | 99657 | 486 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Faecalibacterium | Faecalibacterium prausnitzii | ||
| 13688414 | 13688414 | PRJNA951388_S_NODE_7631_length_307_cov_2.303419_g7504_i0 | PRJNA951388 | 7631 | 307 | 2.303419 | 7.07149633 | Mammaliicoccus stepanovicii | 643214 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|1231729876|emb|LT906462.1| | 643214 | g7504 | i0 | 94.286 | 0.11400651465798 | 35 | 1 | 11 | 1 | 108 | 142 | 1704667 | 1704700 | Staphylococcus stepanovicii strain NCTC13839 genome assembly, chromosome: 1 | blastn | 35 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Mammaliicoccus | Mammaliicoccus stepanovicii | ||
| 16565290 | 16565290 | PRJNA951388_S_NODE_6633_length_330_cov_1.354086_g6506_i0 | PRJNA951388 | 6633 | 330 | 1.354086 | 4.4684838 | Streptococcus | 1301 | Bacteria | Bacteria | 610 | 4.09e-170 | NTclustered | gi|2288405307|gb|CP076703.1| | 1335 | g6506 | i0 | 100 | 538.990909090909 | 330 | 0 | 100 | 0 | 1 | 330 | 19075 | 19404 | Streptococcus equinus strain S1 chromosome, complete genome | blastn | 177867 | 610 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus equinus | ||
| 17512877 | 17512877 | PRJNA951388_S_NODE_13054_length_204_cov_23.015267_g12927_i0 | PRJNA951388 | 13054 | 204 | 23.015267 | 46.95114468 | Caloranaerobacter azorensis | 116090 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|1810187734|gb|CP048617.1| | 116090 | g12927 | i0 | 100 | 0.142156862745098 | 29 | 0 | 14 | 0 | 47 | 75 | 1707585 | 1707613 | Caloranaerobacter azorensis strain T3-1 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Thermohalobacteraceae | Caloranaerobacter | Caloranaerobacter azorensis | ||
| 19114105 | 19114105 | PRJNA951388_S_NODE_7635_length_307_cov_1.970085_g7508_i0 | PRJNA951388 | 7635 | 307 | 1.970085 | 6.04816095 | Staphylococcus | 1279 | Bacteria | Bacteria | 568 | 2.3e-157 | NTclustered | gi|2521904872|gb|CP127705.1| | 1280 | g7508 | i0 | 100 | 506.026058631922 | 307 | 0 | 100 | 0 | 1 | 307 | 2019802 | 2020108 | Staphylococcus aureus strain C351 chromosome, complete genome | blastn | 155350 | 568 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 21336811 | 21336811 | PRJNA951388_S_NODE_11037_length_246_cov_3.115607_g10910_i0 | PRJNA951388 | 11037 | 246 | 3.115607 | 7.66439322 | Caproiciproducens sp. CPB-2 | 3030017 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2663189403|gb|CP142860.1| | 3030017 | g10910 | i0 | 100 | 0.121951219512195 | 30 | 0 | 12 | 0 | 67 | 96 | 1892626 | 1892655 | Caproiciproducens sp. CPB-2 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Acutalibacteraceae | Caproiciproducens | Caproiciproducens sp. CPB-2 | ||
| 22940511 | 22940511 | PRJNA951388_S_NODE_5498_length_360_cov_3.473868_g5371_i0 | PRJNA951388 | 5498 | 360 | 3.473868 | 12.5059248 | Paenibacillus | 44249 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|2700521045|gb|CP147845.1| | 59843 | g5371 | i0 | 99.444 | 13.7638888888889 | 360 | 2 | 100 | 0 | 1 | 360 | 4099727 | 4100086 | Paenibacillus glucanolyticus strain GlSt238 chromosome, complete genome | blastn | 4955 | 654 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus glucanolyticus | ||
| 27474541 | 27474541 | PRJNA951388_S_NODE_10103_length_260_cov_1.390374_g9976_i0 | PRJNA951388 | 10103 | 260 | 1.390374 | 3.6149724 | root | 1 | Root_unresolved | Root_unresolved | 81.6 | 5.62e-16 | NR | ACV20892.1 | 1396 | g9976 | i0 | 74.2 | 3.04615384615385 | 66 | 17 | 76.2 | 0 | 19 | 216 | 107 | 172 | ACV20892.1 enhanced green fluorescent protein [Bacillus cereus] | diamond | 792 | 81.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 27664190 | 27664190 | PRJNA951388_S_NODE_4144_length_403_cov_3.696970_g4017_i0 | PRJNA951388 | 4144 | 403 | 3.69697 | 14.8987891 | Bacteria | 2 | Bacteria | Bacteria | 58.9 | 4.18e-7 | NR | WP_021800335.1 | 36845 | g4017 | i0 | 34.5 | 4.68982630272953 | 113 | 73 | 84.1 | 1 | 3 | 341 | 277 | 388 | WP_021800335.1 threonine ammonia-lyase [Clostridium intestinale] | diamond | 1890 | 58.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium intestinale | ||
| 27822071 | 27822071 | PRJNA951388_S_NODE_11284_length_243_cov_2.264706_g11157_i0 | PRJNA951388 | 11284 | 243 | 2.264706 | 5.50323558 | root | 1 | Root_unresolved | Root_unresolved | 61.2 | 1.06e-8 | NR | ACV20892.1 | 1396 | g11157 | i0 | 54.4 | 4.76543209876543 | 79 | 36 | 97.5 | 0 | 1 | 237 | 153 | 231 | ACV20892.1 enhanced green fluorescent protein [Bacillus cereus] | diamond | 1158 | 61.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 28573050 | 28573050 | PRJNA951388_S_NODE_5487_length_360_cov_5.540070_g5360_i0 | PRJNA951388 | 5487 | 360 | 5.54007 | 19.944252 | Salinibacillus aidingensis | 237684 | Bacteria | Bacteria | 44.3 | 0.0379 | NR | WP_343844082.1 | 237684 | g5360 | i0 | 28.9 | 0.75 | 90 | 55 | 71.7 | 3 | 3 | 260 | 394 | 478 | WP_343844082.1 hypothetical protein [Salinibacillus aidingensis] | diamond | 270 | 44.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Salinibacillus | Salinibacillus aidingensis | ||
| 30405145 | 30405145 | PRJNA951388_S_NODE_1933_length_519_cov_7.130045_g1810_i0 | PRJNA951388 | 1933 | 519 | 7.130045 | 37.00493355 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 78.2 | 1.37e-13 | NR | MBO5113168.1 | 1898203 | g1810 | i0 | 46.7 | 3.65895953757225 | 92 | 46 | 51.4 | 1 | 518 | 252 | 222 | 313 | MBO5113168.1 DnaJ domain-containing protein [Lachnospiraceae bacterium] | diamond | 1899 | 78.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 30910416 | 30910416 | PRJNA951388_S_NODE_2434_length_482_cov_8.092910_g2308_i0 | PRJNA951388 | 2434 | 482 | 8.09291 | 39.0078262 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 88.2 | 2.28e-19 | NR | MBQ5561215.1 | 1898203 | g2308 | i0 | 40.7 | 1.1701244813278 | 86 | 51 | 53.5 | 0 | 322 | 65 | 16 | 101 | MBQ5561215.1 thioredoxin [Lachnospiraceae bacterium] | diamond | 564 | 88.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 31352843 | 31352843 | PRJNA951388_S_NODE_9456_length_271_cov_1.555556_g9329_i0 | PRJNA951388 | 9456 | 271 | 1.555556 | 4.21555676 | Acutalibacteraceae bacterium | 3077420 | Bacteria | Bacteria | 189 | 4.5399999999999995e-57 | NR | MEE1353258.1 | 3077420 | g9329 | i0 | 100 | 0.996309963099631 | 90 | 0 | 99.6 | 0 | 271 | 2 | 57 | 146 | MEE1353258.1 nickel insertion protein [Acutalibacteraceae bacterium] | diamond | 270 | 189 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Acutalibacteraceae | Acutalibacteraceae bacterium | |||
| 31890424 | 31890424 | PRJNA951388_S_NODE_2897_length_456_cov_2.355091_g2770_i0 | PRJNA951388 | 2897 | 456 | 2.355091 | 10.73921496 | Allobacillus | 1400133 | Bacteria | Bacteria | 46.6 | 0.0148 | NR | WP_186279493.1 | 1400133 | g2770 | i0 | 37 | 0.480263157894737 | 73 | 42 | 45.4 | 1 | 182 | 388 | 4 | 76 | WP_186279493.1 MULTISPECIES: ATP-dependent DNA helicase DinG [Allobacillus] | diamond | 219 | 46.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Allobacillus | |||
| 32245420 | 32245420 | PRJNA951388_S_NODE_6118_length_343_cov_2.777778_g5991_i0 | PRJNA951388 | 6118 | 343 | 2.777778 | 9.52777854 | root | 1 | Root_unresolved | Root_unresolved | 58.5 | 3.01e-7 | NR | WP_013859697.1 | 1398 | g5991 | i0 | 43.3 | 3.6997084548105 | 97 | 27 | 83.1 | 2 | 341 | 57 | 35 | 105 | WP_013859697.1 molecular chaperone DnaJ [Heyndrickxia coagulans] | diamond | 1269 | 58.9 | 0.99320882852292 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Heyndrickxia | Heyndrickxia coagulans |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;