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contig_metadata

25 rows where bioproject = "PRJNA951388" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 25 ✖

bioproject 1

  • PRJNA951388 · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4763114 4763114 PRJNA951388_S_NODE_5664_length_356_cov_2.233216_g5537_i0 PRJNA951388 5664 356 2.233216 7.95024896 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.009   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g5537 i0 100 0.415730337078652 29 0 8 0 1 29 10 38 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 148 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
6037882 6037882 PRJNA951388_S_NODE_2465_length_480_cov_5.017199_g2338_i0 PRJNA951388 2465 480 5.017199 24.0825552 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.047   NTclustered gi|829187266|ref|XM_001033288.2| 312017 g2338 i0 100 0.0583333333333333 28 0 6 0 166 193 1611 1584 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
8587736 8587736 PRJNA951388_S_NODE_7467_length_311_cov_1.268908_g7340_i0 PRJNA951388 7467 311 1.268908 3.94630388 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g7340 i0 100 0.183279742765273 29 0 9 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
18786480 18786480 PRJNA951388_S_NODE_10435_length_255_cov_1.582418_g10308_i0 PRJNA951388 10435 255 1.582418 4.0351659 Torodinium robustum 1641413 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2630987758|gb|OR921549.1| 1641413 g10308 i0 100 0.113725490196078 29 0 11 0 227 255 1687 1715 Torodinium robustum isolate Tro-QI4 small subunit ribosomal RNA gene, partial sequence blastn 29 54.7 1 Eukaryota Sar     Dinophyceae Torodiniales Torodiniaceae Torodinium Torodinium robustum
18786498 18786498 PRJNA951388_S_NODE_6335_length_337_cov_20.878788_g6208_i0 PRJNA951388 6335 337 20.878788 70.36151556 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.032   NTclustered gi|2742502725|gb|PP905714.1| 447216 g6208 i0 100 0.166172106824926 28 0 8 0 305 332 1225 1198 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
25160893 25160893 PRJNA951388_S_NODE_8700_length_285_cov_2.537736_g8573_i0 PRJNA951388 8700 285 2.537736 7.2325476 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g8573 i0 100 0.2 29 0 10 0 257 285 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
26993701 26993701 PRJNA951388_S_NODE_5782_length_352_cov_3.279570_g5655_i0 PRJNA951388 5782 352 3.27957 11.5440864 Halteria grandinella 5974 SAR_Eukaryotes SAR_Eukaryotes 47.4 0.00302   NR TNV83925.1 5974 g5655 i0 29.4 0.928977272727273 109 74 90.3 3 350 33 106 214 TNV83925.1 hypothetical protein FGO68_gene17221 [Halteria grandinella] diamond 327 47.4 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
27601069 27601069 PRJNA951388_S_NODE_5884_length_349_cov_6.644928_g5757_i0 PRJNA951388 5884 349 6.644928 23.19079872 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 102 5.929999999999999e-23   NR SBT72431.1 5858 g5757 i0 46.5 17.8452722063037 99 53 85.1 0 4 300 311 409 SBT72431.1 glycylpeptide N-tetradecanoyltransferase, putative [Plasmodium malariae] diamond 6228 102 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
28516565 28516565 PRJNA951388_S_NODE_4147_length_403_cov_2.515152_g4020_i0 PRJNA951388 4147 403 2.515152 10.13606256 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 99 1.3400000000000002e-21   NR XP_004024266.1 5932 g4020 i0 39.5 2.75434243176179 147 72 96.8 4 7 396 26 172 XP_004024266.1 methionyl-tRNA formyltransferase, putative [Ichthyophthirius multifiliis] diamond 1110 100 0.99 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
29148371 29148371 PRJNA951388_S_NODE_4849_length_380_cov_3.006515_g4722_i0 PRJNA951388 4849 380 3.006515 11.424757 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 132 4.16e-33   NR SPQ93971.1 37360 g4722 i0 50.4 9.5921052631579 125 62 98.7 0 4 378 288 412 SPQ93971.1 unnamed protein product [Plasmodiophora brassicae] diamond 3645 132 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29242741 29242741 PRJNA951388_S_NODE_2289_length_490_cov_7.235012_g2163_i0 PRJNA951388 2289 490 7.235012 35.4515588 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 144 7.499999999999999e-38   NR TNV79671.1 5974 g2163 i0 53.7 15.9367346938776 136 61 83.3 1 484 77 273 406 TNV79671.1 hypothetical protein FGO68_gene6240 [Halteria grandinella] diamond 7809 145 0.993103448275862 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
29463311 29463311 PRJNA951388_S_NODE_3810_length_414_cov_3.932551_g3683_i0 PRJNA951388 3810 414 3.932551 16.28076114 Tetraparma 2962634 SAR_Eukaryotes SAR_Eukaryotes 108 1.69e-26   NR GMI20464.1 2962635 g3683 i0 43.8 1.86231884057971 130 57 86.2 4 3 359 80 204 GMI20464.1 hypothetical protein TeGR_g14236 [Tetraparma gracilis] diamond 771 109 0.990825688073395 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Tetraparma Tetraparma gracilis
29583142 29583142 PRJNA951388_S_NODE_10850_length_249_cov_2.142045_g10723_i0 PRJNA951388 10850 249 2.142045 5.33369205 Albugo laibachii Nc14 890382 SAR_Eukaryotes SAR_Eukaryotes 90.5 3.07e-19   NR CCA23064.1 890382 g10723 i0 54.3 0.975903614457831 81 34 97.6 1 5 247 45 122 CCA23064.1 conserved hypothetical protein [Albugo laibachii Nc14] diamond 243 90.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
29747602 29747602 PRJNA951388_S_NODE_9870_length_263_cov_4.052632_g9743_i0 PRJNA951388 9870 263 4.052632 10.65842216 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 92.8 5.25e-20   NR KAF1330494.1 82926 g9743 i0 53.2 4.58555133079848 79 37 90.1 0 2 238 297 375 KAF1330494.1 Adenosine kinase, partial [Globisporangium splendens] diamond 1206 93.6 0.991452991452991 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
30126698 30126698 PRJNA951388_S_NODE_10632_length_252_cov_2.418994_g10505_i0 PRJNA951388 10632 252 2.418994 6.09586488 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 152 2.669999999999999e-43   NR OQS02930.1 74557 g10505 i0 76.8 56.6428571428571 82 19 97.6 0 247 2 27 108 OQS02930.1 ubiquitin-conjugating enzyme E2 [Thraustotheca clavata] diamond 14274 153 0.993464052287582 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
30190022 30190022 PRJNA951388_S_NODE_7272_length_315_cov_4.892562_g7145_i0 PRJNA951388 7272 315 4.892562 15.4115703 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 128 3.6199999999999996e-32   NR OAO14996.1 478820 g7145 i0 75 23.0571428571429 76 19 72.4 0 315 88 495 570 OAO14996.1 lysine--tRNA ligase [Blastocystis sp. ATCC 50177/Nand II] diamond 7263 129 0.992248062015504 Eukaryota Sar     Bigyra Opalinata Blastocystidae Blastocystis Blastocystis hominis
30443018 30443018 PRJNA951388_S_NODE_7373_length_313_cov_2.320833_g7246_i0 PRJNA951388 7373 313 2.320833 7.26420729 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 76.6 7.67e-14   NR XP_001423282.1 5888 g7246 i0 37.9 1.97444089456869 103 64 98.7 0 2 310 254 356 XP_001423282.1 uncharacterized protein GSPATT00000319001 [Paramecium tetraurelia] diamond 618 76.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
30847076 30847076 PRJNA951388_S_NODE_3174_length_442_cov_5.766938_g3047_i0 PRJNA951388 3174 442 5.766938 25.48986596 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 112 5.88e-28   NR XP_001014252.1 312017 g3047 i0 41.7 0.943438914027149 139 80 93.7 1 2 415 54 192 XP_001014252.1 UMP-CMP kinase [Tetrahymena thermophila SB210] diamond 417 112 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30885228 30885228 PRJNA951388_S_NODE_8794_length_283_cov_2.380952_g8667_i0 PRJNA951388 8794 283 2.380952 6.73809416 root 1 Root_unresolved Root_unresolved 68.9 1.84e-12   NR XP_008618707.1 1156394 g8667 i0 37.8 1.54770318021201 74 46 78.4 0 279 58 59 132 XP_008618707.1 hypothetical protein SDRG_14361 [Saprolegnia diclina VS20] diamond 438 68.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
31580871 31580871 PRJNA951388_S_NODE_2436_length_482_cov_6.002445_g2310_i0 PRJNA951388 2436 482 6.002445 28.9317849 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 56.6 5.01e-6   NR KAF1326903.1 82926 g2310 i0 27.7 3.26141078838174 141 93 84.6 3 475 68 184 320 KAF1326903.1 Prostaglandin e synthase, partial [Globisporangium splendens] diamond 1572 57 0.992982456140351 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
32111997 32111997 PRJNA951388_S_NODE_1918_length_520_cov_18.248322_g1795_i0 PRJNA951388 1918 520 18.248322 94.8912744 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.0092   NR GBG31126.1 2315210 g1795 i0 31 0.576923076923077 100 62 54.8 3 410 126 18 115 GBG31126.1 Cystatin-A2 [Hondaea fermentalgiana] diamond 300 45.8 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
32276954 32276954 PRJNA951388_S_NODE_3358_length_433_cov_8.736111_g3231_i0 PRJNA951388 3358 433 8.736111 37.82736063 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 118 7.120000000000001e-29   NR KAK1741407.1 267567 g3231 i0 47.8 7.26096997690531 134 63 88 2 2 382 223 356 KAK1741407.1 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex [Skeletonema marinoi] diamond 3144 119 0.991596638655462 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
32333766 32333766 PRJNA951388_S_NODE_6219_length_340_cov_4.662921_g6092_i0 PRJNA951388 6219 340 4.662921 15.8539314 Phytophthora fragariae 53985 SAR_Eukaryotes SAR_Eukaryotes 80.5 1.44e-16   NR KAE8911393.1 53985 g6092 i0 64.9 7.72941176470588 57 20 50.3 0 3 173 47 103 KAE8911393.1 hypothetical protein PF003_g4481 [Phytophthora fragariae] diamond 2628 80.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
32530118 32530118 PRJNA951388_S_NODE_10019_length_261_cov_2.867021_g9892_i0 PRJNA951388 10019 261 2.867021 7.48292481 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 104 6.05e-25   NR CDW73994.1 5949 g9892 i0 57.6 12.5977011494253 85 36 97.7 0 6 260 28 112 CDW73994.1 protein kinase 2 [Stylonychia lemnae] diamond 3288 104 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32869832 32869832 PRJNA951388_S_NODE_220_length_1094_cov_75.202742_g149_i0 PRJNA951388 220 1094 75.202742 822.71799748 Arachnula sp. CL12 862247 SAR_Eukaryotes SAR_Eukaryotes 213 6.03e-61   NR ADK90073.1 862247 g149 i0 53.3 1.01736745886654 199 69 54.6 3 1094 498 273 447 ADK90073.1 elongation factor 1 alpha, partial [Arachnula sp. CL12] diamond 1113 213 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;