RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA951388" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA951388 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28573049 28573049 PRJNA951388_S_NODE_4567_length_389_cov_5.946203_g4440_i0 PRJNA951388 4567 389 5.946203 23.13072967 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 63.9 7.74e-9   NR KAJ4460321.1 342808 g4440 i0 34.6 3.31619537275064 107 70 82.5 0 384 64 655 761 KAJ4460321.1 putative ABC transporter F family member 1 [Paratrimastix pyriformis] diamond 1290 63.9 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
28952211 28952211 PRJNA951388_S_NODE_4748_length_383_cov_8.329032_g4621_i0 PRJNA951388 4748 383 8.329032 31.90019256 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 68.2 1.43e-11   NR KAJ5076957.1 1746090 g4621 i0 45.7 0.634464751958224 81 43 62.7 1 333 94 40 120 KAJ5076957.1 protein lzic [Anaeramoeba ignava] diamond 243 68.2 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
30063635 30063635 PRJNA951388_S_NODE_8751_length_284_cov_1.995261_g8624_i0 PRJNA951388 8751 284 1.995261 5.66654124 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 8.39e-26   NR KAJ5079680.1 1746090 g8624 i0 58.1 5.75704225352113 86 36 90.8 0 27 284 52 137 KAJ5079680.1 non-specific serine/threonine protein kinase [Anaeramoeba ignava] diamond 1635 110 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;