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contig_metadata

25 rows where bioproject = "PRJNA950981", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 25 ✖

tax_phylum 1

  • Myxococcota · 25 ✖

tax_kingdom 1

bioproject 1

  • PRJNA950981 · 25 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12412936 12412936 PRJNA950981_P_NODE_13610_length_279_cov_1.825243_g13434_i0 PRJNA950981 13610 279 1.825243 5.09242797 Nannocystis pusilla 889268 Bacteria Bacteria 178 4.7199999999999984e-55   NR WP_224194864.1 889268 g13434 i0 88.2 8 93 11 100 0 1 279 6 98 WP_224194864.1 peptidylprolyl isomerase [Nannocystis pusilla] diamond 2232 178 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis pusilla
19113865 19113865 PRJNA950981_P_NODE_7335_length_366_cov_0.979522_g7159_i0 PRJNA950981 7335 366 0.979522 3.58505052 Myxococcota bacterium 2818507 Bacteria Bacteria 149 6.53e-41   NR MFT7626187.1 2818507 g7159 i0 62.9 1.92622950819672 116 40 95.1 3 8 355 172 284 MFT7626187.1 taurine--2-oxoglutarate transaminase [Myxococcota bacterium] diamond 705 149 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
25159981 25159981 PRJNA950981_P_NODE_12200_length_294_cov_1.411765_g12024_i0 PRJNA950981 12200 294 1.411765 4.1505891 Labilithrix luteola 1391654 Bacteria Bacteria 398 3.0399999999999997e-106   NTclustered gi|913610804|gb|CP012333.1| 1391654 g12024 i0 91.186 113.649659863946 295 22 99 4 2 294 3942326 3942034 Labilithrix luteola strain DSM 27648, complete genome blastn 33413 398 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
26899084 26899084 PRJNA950981_P_NODE_7281_length_367_cov_1.326531_g7105_i0 PRJNA950981 7281 367 1.326531 4.86836877 Kofleriaceae bacterium 2212474 Bacteria Bacteria 48.9 8.86e-4   NR HEY4240652.1 2212474 g7105 i0 35.4 4.27520435967302 99 41 66.2 5 66 308 109 202 HEY4240652.1 hypothetical protein [Kofleriaceae bacterium] diamond 1569 48.9 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
26993667 26993667 PRJNA950981_P_NODE_12102_length_295_cov_1.405405_g11926_i0 PRJNA950981 12102 295 1.405405 4.14594475 Myxococcaceae bacterium 2484252 Bacteria Bacteria 64.7 1.21e-9   NR MEI6790489.1 2484252 g11926 i0 55.6 0.549152542372881 54 24 54.9 0 279 118 332 385 MEI6790489.1 GMC family oxidoreductase N-terminal domain-containing protein [Myxococcaceae bacterium] diamond 162 64.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
27000294 27000294 PRJNA950981_P_NODE_19162_length_247_cov_1.321839_g18986_i0 PRJNA950981 19162 247 1.321839 3.26494233 Bacteria 2 Bacteria Bacteria 94.7 1.86e-20   NR HZH03096.1 2484252 g18986 i0 56.8 6.36437246963563 81 35 98.4 0 245 3 261 341 HZH03096.1 ABC transporter transmembrane domain-containing protein [Myxococcaceae bacterium] diamond 1572 94.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae   Myxococcaceae bacterium
27341804 27341804 PRJNA950981_P_NODE_13443_length_281_cov_1.360577_g13267_i0 PRJNA950981 13443 281 1.360577 3.82322137 Cystobacter fuscus 43 Bacteria Bacteria 76.6 4.75e-14   NR WP_395848649.1 43 g13267 i0 53.3 2.95729537366548 92 31 96.1 6 12 281 236 317 WP_395848649.1 M35 family metallo-endopeptidase [Cystobacter fuscus] diamond 831 76.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter fuscus
28036416 28036416 PRJNA950981_P_NODE_8225_length_349_cov_0.847826_g8049_i0 PRJNA950981 8225 349 0.847826 2.95891274 Polyangiales bacterium 3034171 Bacteria Bacteria 47 0.0035   NR MFO0652429.1 3034171 g8049 i0 33 0.756446991404012 88 54 73.1 4 348 94 206 291 MFO0652429.1 hypothetical protein [Polyangiales bacterium] diamond 264 47 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
28351991 28351991 PRJNA950981_P_NODE_18546_length_249_cov_0.886364_g18370_i0 PRJNA950981 18546 249 0.886364 2.20704636 Polyangiaceae bacterium 2268199 Bacteria Bacteria 77.4 2.47e-14   NR HEY6460759.1 2268199 g18370 i0 52.9 1.73493975903614 70 32 83.1 1 37 243 353 422 HEY6460759.1 thaumatin family protein [Polyangiaceae bacterium] diamond 432 77.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28509963 28509963 PRJNA950981_P_NODE_16067_length_256_cov_1.704918_g15891_i0 PRJNA950981 16067 256 1.704918 4.36459008 Kofleriaceae bacterium 2212474 Bacteria Bacteria 125 2.09e-33   NR HEX5062729.1 2212474 g15891 i0 64.6 0.9609375 82 29 96.1 0 256 11 121 202 HEX5062729.1 M15 family metallopeptidase [Kofleriaceae bacterium] diamond 246 125 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
28730986 28730986 PRJNA950981_P_NODE_6367_length_389_cov_0.987342_g6191_i0 PRJNA950981 6367 389 0.987342 3.84076038 Myxococcales bacterium 2026763 Bacteria Bacteria 47 0.00552   NR MBL0212867.1 2026763 g6191 i0 44.4 0.416452442159383 54 28 41.6 1 370 209 373 424 MBL0212867.1 tyrosine--tRNA ligase [Myxococcales bacterium] diamond 162 47 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28926927 28926927 PRJNA950981_P_NODE_17468_length_251_cov_0.876404_g17292_i0 PRJNA950981 17468 251 0.876404 2.19977404 Pseudomonadati 3379134 Bacteria Bacteria 79 2.22e-16   NR UCD85006.1 2026735 g17292 i0 47 10.7689243027888 83 44 99.2 0 250 2 34 116 UCD85006.1 MAG: Hsp20/alpha crystallin family protein [Deltaproteobacteria bacterium] diamond 2703 79 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28952188 28952188 PRJNA950981_P_NODE_10208_length_318_cov_1.587755_g10032_i0 PRJNA950981 10208 318 1.587755 5.0490609 Polyangiales bacterium 3034171 Bacteria Bacteria 94.4 6.91e-20   NR MFO0651061.1 3034171 g10032 i0 48 1.86792452830189 100 52 94.3 0 302 3 298 397 MFO0651061.1 hypothetical protein [Polyangiales bacterium] diamond 594 94.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
29109934 29109934 PRJNA950981_P_NODE_5548_length_414_cov_1.372434_g5372_i0 PRJNA950981 5548 414 1.372434 5.68187676 Myxococcales bacterium 2026763 Bacteria Bacteria 139 4.069999999999999e-35   NR MDO9017237.1 2026763 g5372 i0 51.4 1.94202898550725 138 66 99.3 1 4 414 283 420 MDO9017237.1 hypothetical protein [Myxococcales bacterium] diamond 804 139 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29173152 29173152 PRJNA950981_P_NODE_11089_length_307_cov_1.299145_g10913_i0 PRJNA950981 11089 307 1.299145 3.98837515 Myxococcales bacterium 2026763 Bacteria Bacteria 80.9 2.16e-15   NR RYE89468.1 2026763 g10913 i0 53.6 1.71986970684039 84 38 82.1 1 257 6 9 91 RYE89468.1 MAG: hypothetical protein EOO75_11760, partial [Myxococcales bacterium] diamond 528 80.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29173154 29173154 PRJNA950981_P_NODE_17449_length_251_cov_0.876404_g17273_i0 PRJNA950981 17449 251 0.876404 2.19977404 Bradymonadia bacterium 3121696 Bacteria Bacteria 77.4 1.07e-15   NR MFT6398796.1 3121696 g17273 i0 52.9 4.87649402390438 70 32 83.7 1 31 240 3 71 MFT6398796.1 putative membrane protein YedE/YeeE [Bradymonadia bacterium] diamond 1224 77.4 1 Bacteria   Pseudomonadati Myxococcota Bradymonadia       Bradymonadia bacterium
29236232 29236232 PRJNA950981_P_NODE_20229_length_245_cov_0.906977_g20053_i0 PRJNA950981 20229 245 0.906977 2.22209365 Polyangiales bacterium 3034171 Bacteria Bacteria 46.6 0.00173   NR HKP64827.1 3034171 g20053 i0 48 1.22448979591837 50 25 61.2 1 49 198 1132 1180 HKP64827.1 clostripain-related cysteine peptidase [Polyangiales bacterium] diamond 300 46.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
29369033 29369033 PRJNA950981_P_NODE_16269_length_254_cov_2.077348_g16093_i0 PRJNA950981 16269 254 2.077348 5.27646392 root 1 Root_unresolved Root_unresolved 44.3 0.0121   NR PZR09590.1 48 g16093 i0 39.1 3.72047244094488 64 34 74.4 3 41 229 21 80 PZR09590.1 MAG: hypothetical protein DI536_21865 [Archangium gephyra] diamond 945 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium gephyra
31289336 31289336 PRJNA950981_P_NODE_17815_length_250_cov_0.881356_g17639_i0 PRJNA950981 17815 250 0.881356 2.20339 Myxococcales bacterium 2026763 Bacteria Bacteria 43.1 0.0284   NR MCH8891761.1 2026763 g17639 i0 33.3 2.016 84 53 97.2 2 6 248 122 205 MCH8891761.1 heme lyase CcmF/NrfE family subunit [Myxococcales bacterium] diamond 504 43.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31447635 31447635 PRJNA950981_P_NODE_10716_length_312_cov_1.179916_g10540_i0 PRJNA950981 10716 312 1.179916 3.68133792 Myxococcota bacterium 2818507 Bacteria Bacteria 55.1 3.55e-6   NR MEO0814787.1 2818507 g10540 i0 38.9 1.625 72 44 69.2 0 3 218 292 363 MEO0814787.1 ubiquitin-like protein [Myxococcota bacterium] diamond 507 55.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
31763920 31763920 PRJNA950981_P_NODE_18457_length_249_cov_0.886364_g18281_i0 PRJNA950981 18457 249 0.886364 2.20704636 Myxococcota bacterium 2818507 Bacteria Bacteria 47 0.00129   NR MBP7125131.1 2818507 g18281 i0 52.3 0.530120481927711 44 16 47 1 69 185 998 1041 MBP7125131.1 S8 family serine peptidase [Myxococcota bacterium] diamond 132 47 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32270329 32270329 PRJNA950981_P_NODE_16558_length_253_cov_0.866667_g16382_i0 PRJNA950981 16558 253 0.866667 2.19266751 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 85.1 5.07e-17   NR MCB9727208.1 2026735 g16382 i0 59.6 0.675889328063241 57 21 65.2 1 251 87 912 968 MCB9727208.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 171 85.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32460113 32460113 PRJNA950981_P_NODE_11259_length_305_cov_1.344828_g11083_i0 PRJNA950981 11259 305 1.344828 4.1017254 Myxococcales bacterium 2026763 Bacteria Bacteria 63.5 1.23e-9   NR MCA9634375.1 2026763 g11083 i0 59.6 1.12131147540984 47 19 46.2 0 164 304 75 121 MCA9634375.1 hypothetical protein [Myxococcales bacterium] diamond 342 63.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32555230 32555230 PRJNA950981_P_NODE_16239_length_255_cov_0.923077_g16063_i0 PRJNA950981 16239 255 0.923077 2.35384635 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 80.5 2.13e-15   NR RJR45769.1 2026735 g16063 i0 52.9 4.02352941176471 68 31 80 1 51 254 376 442 RJR45769.1 MAG: NAD(FAD)-dependent dehydrogenase [Deltaproteobacteria bacterium] diamond 1026 80.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32555233 32555233 PRJNA950981_P_NODE_21079_length_243_cov_0.917647_g20903_i0 PRJNA950981 21079 243 0.917647 2.22988221 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 80.9 1.44e-15   NR MBI3294266.1 2026735 g20903 i0 53.2 0.975308641975309 79 36 97.5 1 237 1 71 148 MBI3294266.1 response regulator [Deltaproteobacteria bacterium] diamond 237 80.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;