RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA950981" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA950981 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7311866 7311866 PRJNA950981_P_NODE_13966_length_276_cov_1.108374_g13790_i0 PRJNA950981 13966 276 1.108374 3.05911224 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 159 1.6199999999999999e-46   NR PJF16814.1 1246581 g13790 i0 80.2 0.989130434782609 91 18 98.9 0 275 3 109 199 PJF16814.1 40S ribosomal protein S4 [Paramicrosporidium saccamoebae] diamond 273 159 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
14961672 14961672 PRJNA950981_P_NODE_18372_length_249_cov_0.886364_g18196_i0 PRJNA950981 18372 249 0.886364 2.20704636 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 102 1.74e-24   NR PJF16614.1 1246581 g18196 i0 73.2 0.987951807228916 82 22 98.8 0 2 247 160 241 PJF16614.1 40S ribosomal protein S6 [Paramicrosporidium saccamoebae] diamond 246 102 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
27404994 27404994 PRJNA950981_P_NODE_6063_length_398_cov_1.876923_g5887_i0 PRJNA950981 6063 398 1.876923 7.47015354 Rozella allomycis CSF55 988480 Fungi Fungi 70.5 4.07e-11   NR EPZ36196.1 988480 g5887 i0 46.5 0.535175879396985 71 38 53.5 0 240 28 549 619 EPZ36196.1 High mobility group (HMG) box domain-containing protein [Rozella allomycis CSF55] diamond 213 70.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;