RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA950981" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA950981 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18785596 18785596 PRJNA950981_P_NODE_11615_length_301_cov_1.368421_g11439_i0 PRJNA950981 11615 301 1.368421 4.11894721 Cercomonas agilis 310805 SAR_Eukaryotes SAR_Eukaryotes 320 6.95e-83   NTclustered gi|58414956|gb|AY748813.1| 310805 g11439 i0 88.104 193.940199335548 269 32 89 0 3 271 269 1 Cercomonas agilis polyubiquitin (UBQ) gene, partial cds blastn 58376 320 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas agilis
25160013 25160013 PRJNA950981_P_NODE_5860_length_404_cov_1.374622_g5684_i0 PRJNA950981 5860 404 1.374622 5.55347288 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 736 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g5684 i0 99.505 68.0915841584158 404 2 100 0 1 404 2076 1673 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 27509 736 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
25489045 25489045 PRJNA950981_P_NODE_8280_length_348_cov_0.992727_g8104_i0 PRJNA950981 8280 348 0.992727 3.45468996 Imbricatea 1736114 SAR_Eukaryotes SAR_Eukaryotes 285 2.99e-72   NTclustered gi|238617602|gb|FJ973377.1| 188950 g8104 i0 98.171 61.7097701149425 164 2 47 1 1 163 3254 3417 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 21475 287 0.993031358885017 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
26677048 26677048 PRJNA950981_P_NODE_19961_length_246_cov_0.878613_g19785_i0 PRJNA950981 19961 246 0.878613 2.16138798 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 153 6.06e-46   NR ADK26622.1 323453 g19785 i0 86.3 0.975609756097561 80 11 97.6 0 2 241 51 130 ADK26622.1 rps22a [Heteromita sp. PRA-74] diamond 240 153 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;