contig_metadata
10 rows where bioproject = "PRJNA950981", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6366563 | 6366563 | PRJNA950981_P_NODE_12465_length_291_cov_1.431193_g12289_i0 | PRJNA950981 | 12465 | 291 | 1.431193 | 4.16477163 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 368 | 2.36e-97 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g12289 | i0 | 89.619 | 143.604810996564 | 289 | 30 | 99 | 0 | 3 | 291 | 18 | 306 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 41789 | 368 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 11466286 | 11466286 | PRJNA950981_P_NODE_3529_length_511_cov_1.805936_g3354_i0 | PRJNA950981 | 3529 | 511 | 1.805936 | 9.22833296 | Bdellovibrio | 958 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g3354 | i0 | 89.675 | 196.234833659491 | 523 | 40 | 100 | 10 | 1 | 511 | 1677606 | 1677086 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 100276 | 660 | 0.990909090909091 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 17839908 | 17839908 | PRJNA950981_P_NODE_14894_length_267_cov_1.608247_g14718_i0 | PRJNA950981 | 14894 | 267 | 1.608247 | 4.29401949 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 159 | 1.4e-34 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g14718 | i0 | 78.092 | 87.5505617977528 | 283 | 41 | 100 | 13 | 1 | 267 | 1377 | 1654 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 23376 | 159 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 20060507 | 20060507 | PRJNA950981_P_NODE_19996_length_245_cov_1.813953_g19820_i0 | PRJNA950981 | 19996 | 245 | 1.813953 | 4.44418485 | Bdellovibrio sp. NC01 | 2220073 | Bacteria | Bacteria | 169 | 2.1e-37 | NTclustered | gi|1700686220|gb|CP030034.1| | 2220073 | g19820 | i0 | 79.92 | 87.6040816326531 | 249 | 34 | 95 | 7 | 13 | 245 | 861476 | 861724 | Bdellovibrio sp. NC01 chromosome, complete genome | blastn | 21463 | 169 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. NC01 | ||
| 22610820 | 22610820 | PRJNA950981_P_NODE_12778_length_288_cov_0.851163_g12602_i0 | PRJNA950981 | 12778 | 288 | 0.851163 | 2.45134944 | Bdellovibrio sp. HCB337 | 3394358 | Bacteria | Bacteria | 344 | 3.929999999999999e-90 | NTclustered | gi|2895525383|gb|CP178621.1| | 3394358 | g12602 | i0 | 88.276 | 281.326388888889 | 290 | 30 | 100 | 4 | 1 | 288 | 3447719 | 3448006 | Bdellovibrio sp. HCB337 chromosome, complete genome | blastn | 81022 | 344 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB337 | ||
| 24214122 | 24214122 | PRJNA950981_P_NODE_2719_length_579_cov_2.332016_g2546_i0 | PRJNA950981 | 2719 | 579 | 2.332016 | 13.50237264 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 957 | 0 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g2546 | i0 | 96.398 | 195.113989637306 | 583 | 17 | 100 | 2 | 1 | 579 | 504 | 1086 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 112971 | 957 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 24214129 | 24214129 | PRJNA950981_P_NODE_9759_length_325_cov_1.210317_g9583_i0 | PRJNA950981 | 9759 | 325 | 1.210317 | 3.93353025 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 448 | 3.3299999999999996e-121 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g9583 | i0 | 91.489 | 106.504615384615 | 329 | 22 | 100 | 6 | 1 | 325 | 413 | 87 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 34614 | 448 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 25489042 | 25489042 | PRJNA950981_P_NODE_3660_length_502_cov_1.794872_g3485_i0 | PRJNA950981 | 3660 | 502 | 1.794872 | 9.01025744 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 811 | 0 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g3485 | i0 | 95.817 | 91.6653386454183 | 502 | 21 | 100 | 0 | 1 | 502 | 1724 | 1223 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 46016 | 811 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 26746855 | 26746855 | PRJNA950981_P_NODE_21781_length_242_cov_0.923077_g21605_i0 | PRJNA950981 | 21781 | 242 | 0.923077 | 2.23384634 | Bdellovibrio | 958 | Bacteria | Bacteria | 129 | 1.7e-32 | NR | WP_063245168.1 | 959 | g21605 | i0 | 76.3 | 6.8801652892562 | 80 | 19 | 99.2 | 0 | 1 | 240 | 637 | 716 | WP_063245168.1 type II secretion system secretin GspD [Bdellovibrio bacteriovorus] | diamond | 1665 | 130 | 0.992307692307692 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 31890394 | 31890394 | PRJNA950981_P_NODE_20677_length_244_cov_0.912281_g20501_i0 | PRJNA950981 | 20677 | 244 | 0.912281 | 2.22596564 | Halobacteriovorax marinus | 97084 | Bacteria | Bacteria | 60.5 | 1.85e-8 | NR | WP_096909605.1 | 97084 | g20501 | i0 | 34.6 | 0.959016393442623 | 78 | 43 | 95.9 | 1 | 3 | 236 | 268 | 337 | WP_096909605.1 lipoate--protein ligase [Halobacteriovorax marinus] | diamond | 234 | 60.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovorax | Halobacteriovorax marinus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;