RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA950981" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA950981 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28295366 28295366 PRJNA950981_P_NODE_20766_length_244_cov_0.912281_g20590_i0 PRJNA950981 20766 244 0.912281 2.22596564 Thermoprotei 183924 Archaea Archaea 64.7 4.18e-10   NR MEM4965720.1 2268200 g20590 i0 38.3 9.81147540983607 81 50 99.6 0 2 244 73 153 MEM4965720.1 slipin family protein [Sulfolobales archaeon] diamond 2394 64.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales     Sulfolobales archaeon
29684404 29684404 PRJNA950981_P_NODE_18610_length_248_cov_2.228571_g18434_i0 PRJNA950981 18610 248 2.228571 5.52685608 root 1 Root_unresolved Root_unresolved 68.9 1.53e-11   NR HUI85832.1 2268197 g18434 i0 47.4 5.74596774193548 78 38 94.4 2 13 246 125 199 HUI85832.1 hypothetical protein [Nitrososphaerales archaeon] diamond 1425 69.3 0.994227994227994 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;