RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA950981", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA950981 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8586834 8586834 PRJNA950981_P_NODE_21907_length_238_cov_4.575758_g21731_i0 PRJNA950981 21907 238 4.575758 10.89030404 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 407 3.9599999999999994e-109   NTclustered gi|68479954|gb|DQ076149.1| 6182 g21731 i0 97.479 1 238 6 100 0 1 238 12 249 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 238 407 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
10191242 10191242 PRJNA950981_P_NODE_7348_length_365_cov_2.527397_g7172_i0 PRJNA950981 7348 365 2.527397 9.22499905 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.2 2.07e-4   NTclustered gi|2224869|gb|U53001.1|DLU53001 27895 g7172 i0 100 8.91506849315068 32 0 9 0 220 251 80 111 Dendrocoelum lacteum ribosomal RNA large subunit gene, partial sequence blastn 3254 60.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dendrocoelidae Dendrocoelum Dendrocoelum lacteum
16565030 16565030 PRJNA950981_P_NODE_8733_length_340_cov_1.460674_g8557_i0 PRJNA950981 8733 340 1.460674 4.9662916 Metazoa 33208 Platyhelminthes Platyhelminthes 628 1.1699999999999999e-175   NTclustered gi|60687563|gb|AY914894.1| 6182 g8557 i0 100 100 340 0 100 0 1 340 526 187 Schistosoma japonicum unknown mRNA blastn 34000 628 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
19113852 19113852 PRJNA950981_P_NODE_11855_length_298_cov_1.386667_g11679_i0 PRJNA950981 11855 298 1.386667 4.13226766 Fasciolopsis buskii 27845 Platyhelminthes Platyhelminthes 170 1.1599999999999998e-48   NR KAA0198055.1 27845 g11679 i0 80.8 5.97986577181208 99 19 99.7 0 2 298 343 441 KAA0198055.1 Elongation factor 1-alpha C [Fasciolopsis buskii] diamond 1782 170 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciolopsis Fasciolopsis buskii
27474534 27474534 PRJNA950981_P_NODE_18743_length_248_cov_0.891429_g18567_i0 PRJNA950981 18743 248 0.891429 2.21074392 Schistosomatidae 31245 Platyhelminthes Platyhelminthes 63.2 2.58e-9   NR KAH8876088.1 6182 g18567 i0 37.5 12.1935483870968 72 44 87.1 1 234 19 268 338 KAH8876088.1 Myotubularin-related protein 3 [Schistosoma japonicum] diamond 3024 63.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30537662 30537662 PRJNA950981_P_NODE_16833_length_252_cov_1.430168_g16657_i0 PRJNA950981 16833 252 1.430168 3.60402336 Hymenolepididae 6214 Platyhelminthes Platyhelminthes 48.1 3.66e-4   NR CUU00454.1 85433 g16657 i0 43.8 1.54761904761905 64 31 71.4 3 62 241 13 75 CUU00454.1 hypothetical transcript [Hymenolepis microstoma] diamond 390 48.5 0.991752577319588 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
30917008 30917008 PRJNA950981_P_NODE_6454_length_386_cov_1.987220_g6278_i0 PRJNA950981 6454 386 1.98722 7.6706692 root 1 Root_unresolved Root_unresolved 141 5.7e-36   NR QHH25944.1 6161 g6278 i0 47.6 25.4222797927461 126 66 97.9 0 2 379 596 721 QHH25944.1 translation elongation factor 2, partial [Dugesia japonica] diamond 9813 142 0.992957746478873 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
31011549 31011549 PRJNA950981_P_NODE_16434_length_253_cov_1.300000_g16258_i0 PRJNA950981 16434 253 1.3 3.289 Cyclophyllidea 6201 Platyhelminthes Platyhelminthes 75.9 8.37e-14   NR CDS20669.1 6210 g16258 i0 41.2 4.88537549407115 85 43 98.4 2 2 250 278 357 CDS20669.1 ectonucleotide pyrophosphatase:phosphodiesterase [Echinococcus granulosus] diamond 1236 76.6 0.990861618798956 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
31890395 31890395 PRJNA950981_P_NODE_21257_length_243_cov_0.917647_g21081_i0 PRJNA950981 21257 243 0.917647 2.22988221 Calicophoron daubneyi 300641 Platyhelminthes Platyhelminthes 42.7 0.0374   NR CAL5134184.1 300641 g21081 i0 38.1 0.777777777777778 63 36 75.3 2 60 242 761 822 CAL5134184.1 unnamed protein product [Calicophoron daubneyi] diamond 189 42.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;