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contig_metadata

21 rows where bioproject = "PRJNA950981", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 21 ✖

tax_kingdom 1

  • Metazoa · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA950981 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2209177 2209177 PRJNA950981_P_NODE_4242_length_468_cov_1.501266_g4067_i0 PRJNA950981 4242 468 1.501266 7.02592488 Caenorhabditis briggsae 6238 Nematoda Nematoda 254 1.16e-62   NTclustered gi|268580870|ref|XM_002645372.1| 6238 g4067 i0 82.807 15.7029914529915 285 48 61 1 56 339 938 654 Caenorhabditis briggsae Protein CBR-SAMS-1 (Cbr-sams-1), partial mRNA blastn 7349 254 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
11137476 11137476 PRJNA950981_P_NODE_16589_length_253_cov_0.866667_g16413_i0 PRJNA950981 16589 253 0.866667 2.19266751 Onchocercidae 6296 Nematoda Nematoda 63.2 2.67e-9   NR XP_042933799.1 6279 g16413 i0 57.7 2.46640316205534 52 22 61.7 0 252 97 311 362 XP_042933799.1 Calreticulin family protein [Brugia malayi] diamond 624 63.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia malayi
15290415 15290415 PRJNA950981_P_NODE_6532_length_384_cov_1.694534_g6356_i0 PRJNA950981 6532 384 1.694534 6.50701056 Metazoa 33208 Nematoda Nematoda 158 2.93e-46   NR KAH7731741.1 70226 g6356 i0 59.2 9.0546875 130 50 99.2 2 383 3 16 145 KAH7731741.1 Protein RAL-1 a [Aphelenchoides avenae] diamond 3477 159 0.993710691823899 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
16236710 16236710 PRJNA950981_P_NODE_7813_length_356_cov_1.840989_g7637_i0 PRJNA950981 7813 356 1.840989 6.55392084 Pristionchus sp. 15 RS5229 452809 Nematoda Nematoda 183 1.15e-41   NTclustered gi|150984457|gb|EF634871.1| 452809 g7637 i0 77.492 26.0056179775281 311 66 87 3 48 356 329 21 Pristionchus sp. 15 RS5229 small subunit ribosomal protein 8 (rps-8) mRNA, partial cds blastn 9258 183 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus sp. 15 RS5229
17512037 17512037 PRJNA950981_P_NODE_21174_length_243_cov_0.917647_g20998_i0 PRJNA950981 21174 243 0.917647 2.22988221 root 1 Root_unresolved Root_unresolved 130 6.98e-33   NR KAI6214930.1 269767 g20998 i0 81.2 5.55555555555556 69 13 85.2 0 241 35 928 996 KAI6214930.1 Dihydropyrimidine dehydrogenase [NADP(+)] [Aphelenchoides besseyi] diamond 1350 131 0.99236641221374 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
17512050 17512050 PRJNA950981_P_NODE_5634_length_411_cov_1.884615_g5458_i0 PRJNA950981 5634 411 1.884615 7.74576765 Trichinella spiralis 6334 Nematoda Nematoda 195 1.47e-58   NR KRY41729.1 6334 g5458 i0 72.2 3.64233576642336 126 35 92 0 380 3 226 351 KRY41729.1 60S ribosomal protein L27a [Trichinella spiralis] diamond 1497 195 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
21335941 21335941 PRJNA950981_P_NODE_16337_length_254_cov_1.270718_g16161_i0 PRJNA950981 16337 254 1.270718 3.22762372 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 166 1.93e-48   NR MCP9256899.1 6287 g16161 i0 88.1 173.610236220472 84 10 99.2 0 2 253 153 236 MCP9256899.1 Serine/threonine-protein phosphatase [Dirofilaria immitis] diamond 44097 166 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
21335970 21335970 PRJNA950981_P_NODE_6677_length_380_cov_1.599349_g6501_i0 PRJNA950981 6677 380 1.599349 6.0775262 Diplogastrellus gracilis 669117 Nematoda Nematoda 206 2.63e-48   NTclustered gi|256709130|gb|GQ422217.1| 669117 g6501 i0 79.47 66.2263157894737 302 52 78 8 36 332 427 723 Diplogastrellus gracilis large subunit ribosomal protein 2 (rpl-2) mRNA, partial cds blastn 25166 206 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Diplogastrellus Diplogastrellus gracilis
21335972 21335972 PRJNA950981_P_NODE_7217_length_368_cov_1.586441_g7041_i0 PRJNA950981 7217 368 1.586441 5.83810288 Pristionchus pauli 376545 Nematoda Nematoda 230 1.4999999999999999e-55   NTclustered gi|150982019|gb|EF634598.1| 376545 g7041 i0 80.323 5.33423913043478 310 55 83 6 62 368 37 343 Pristionchus pauli large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds blastn 1963 230 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pauli
26683814 26683814 PRJNA950981_P_NODE_12741_length_288_cov_1.451163_g12565_i0 PRJNA950981 12741 288 1.451163 4.17934944 Rhabditida 6236 Nematoda Nematoda 127 2.13e-34   NR KAE9420971.1 6313 g12565 i0 67 11.4270833333333 91 30 94.8 0 287 15 93 183 KAE9420971.1 hypothetical protein Angca_002129 [Angiostrongylus cantonensis] diamond 3291 127 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
26962115 26962115 PRJNA950981_P_NODE_22102_length_228_cov_2.012903_g21926_i0 PRJNA950981 22102 228 2.012903 4.5894188400000004 Auanema sp. JU1783 2878363 Nematoda Nematoda 58.5 3.32e-8   NR CAI4222289.1 2878363 g21926 i0 51.7 0.763157894736842 58 25 75 2 210 40 1 56 CAI4222289.1 unnamed protein product [Auanema sp. JU1783] diamond 174 58.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
27373526 27373526 PRJNA950981_P_NODE_15543_length_261_cov_1.404255_g15367_i0 PRJNA950981 15543 261 1.404255 3.66510555 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 61.2 1.4e-8   NR KAE9547480.1 2598192 g15367 i0 40.3 0.827586206896552 72 42 82.8 1 251 36 555 625 KAE9547480.1 hypothetical protein FO519_009307, partial [Halicephalobus sp. NKZ332] diamond 216 61.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
27594396 27594396 PRJNA950981_P_NODE_5444_length_417_cov_3.098837_g5268_i0 PRJNA950981 5444 417 3.098837 12.92215029 Pristionchus fissidentatus 1538716 Nematoda Nematoda 92.8 3.36e-21   NR GMT18625.1 1538716 g5268 i0 42 0.942446043165468 131 70 93.5 3 416 27 1 126 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 393 92.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
27664183 27664183 PRJNA950981_P_NODE_20124_length_245_cov_0.906977_g19948_i0 PRJNA950981 20124 245 0.906977 2.22209365 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 92 6.95e-20   NR OUC46811.1 6335 g19948 i0 56.4 14.265306122449 78 32 93.1 1 12 239 200 277 OUC46811.1 kinase domain protein, partial [Trichinella nativa] diamond 3495 92.8 0.991379310344828 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella nativa
27822064 27822064 PRJNA950981_P_NODE_16624_length_253_cov_0.866667_g16448_i0 PRJNA950981 16624 253 0.866667 2.19266751 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 109 1.32e-26   NR XP_045091399.1 6238 g16448 i0 57.8 43.3280632411067 83 35 98.4 0 251 3 216 298 XP_045091399.1 Protein CBR-GOA-1 [Caenorhabditis briggsae] diamond 10962 109 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
28351990 28351990 PRJNA950981_P_NODE_10026_length_321_cov_1.258065_g9850_i0 PRJNA950981 10026 321 1.258065 4.03838865 Ditylenchus destructor 166010 Nematoda Nematoda 59.7 1.07e-7   NR KAI1705971.1 166010 g9850 i0 35.3 3.90654205607477 85 50 79.4 1 297 43 377 456 KAI1705971.1 enoyl-(Acyl carrier protein) reductase domain-containing protein [Ditylenchus destructor] diamond 1254 59.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
29267476 29267476 PRJNA950981_P_NODE_21189_length_243_cov_0.917647_g21013_i0 PRJNA950981 21189 243 0.917647 2.22988221 Aphelenchoides besseyi 269767 Nematoda Nematoda 43.5 0.0171   NR KAI6196838.1 269767 g21013 i0 32.4 2.80246913580247 71 46 87.7 1 16 228 66 134 KAI6196838.1 hypothetical protein M3Y94_01155900 [Aphelenchoides besseyi] diamond 681 43.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
30657429 30657429 PRJNA950981_P_NODE_12393_length_292_cov_1.242009_g12217_i0 PRJNA950981 12393 292 1.242009 3.62666628 Caenorhabditis remanei 31234 Nematoda Nematoda 118 2.1e-28   NR EFP01601.1 31234 g12217 i0 79.1 8.26027397260274 67 14 68.8 0 291 91 694 760 EFP01601.1 hypothetical protein CRE_03500 [Caenorhabditis remanei] diamond 2412 118 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
31131143 31131143 PRJNA950981_P_NODE_20735_length_244_cov_0.912281_g20559_i0 PRJNA950981 20735 244 0.912281 2.22596564 Aphelenchoides besseyi 269767 Nematoda Nematoda 83.6 1.62e-16   NR KAI6215006.1 269767 g20559 i0 48.7 4.77049180327869 76 36 93.4 1 237 10 71 143 KAI6215006.1 Phospholipid-transporting ATPase [Aphelenchoides besseyi] diamond 1164 83.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides besseyi
31200744 31200744 PRJNA950981_P_NODE_16475_length_253_cov_0.866667_g16299_i0 PRJNA950981 16475 253 0.866667 2.19266751 Rhabditida 6236 Nematoda Nematoda 68.6 3.5e-11   NR KAE9421197.1 6313 g16299 i0 49.2 1.49407114624506 63 30 74.7 1 189 1 871 931 KAE9421197.1 hypothetical protein Angca_004087, partial [Angiostrongylus cantonensis] diamond 378 68.9 0.995645863570392 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
31447638 31447638 PRJNA950981_P_NODE_17176_length_252_cov_0.871508_g17000_i0 PRJNA950981 17176 252 0.871508 2.19620016 Aphelenchoides avenae 70226 Nematoda Nematoda 57.8 2.01e-7   NR KAH7712903.1 70226 g17000 i0 42.3 0.845238095238095 71 39 82.1 1 211 5 161 231 KAH7712903.1 Protein F09A5.2 [Aphelenchoides avenae] diamond 213 57.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;