RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA950981", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA950981 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7311898 7311898 PRJNA950981_P_NODE_3986_length_483_cov_2.570732_g3811_i0 PRJNA950981 3986 483 2.570732 12.41663556 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 104 6.1199999999999996e-24   NR TEB19254.1 2494336 g3811 i0 43.8 0.807453416149068 130 68 80.1 3 57 443 138 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 390 104 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
30973556 30973556 PRJNA950981_P_NODE_8594_length_342_cov_2.520446_g8418_i0 PRJNA950981 8594 342 2.520446 8.61992532 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 72 2.3e-12   NR TEB19254.1 2494336 g8418 i0 51.9 0.675438596491228 77 34 67.5 2 341 111 190 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 231 72 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
32340221 32340221 PRJNA950981_P_NODE_18399_length_249_cov_0.886364_g18223_i0 PRJNA950981 18399 249 0.886364 2.20704636 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0405   NR KAF4655063.1 32597 g18223 i0 31.6 2.74698795180723 76 51 90.4 1 14 238 446 521 KAF4655063.1 hypothetical protein FOL46_008401 [Perkinsus olseni] diamond 684 43.1 0.990719257540603 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32838267 32838267 PRJNA950981_P_NODE_15980_length_257_cov_1.695652_g15804_i0 PRJNA950981 15980 257 1.695652 4.35782564 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 105 1.56e-24   NR KAF4731232.1 32597 g15804 i0 71 6.42023346303502 69 20 80.5 0 3 209 32 100 KAF4731232.1 hypothetical protein FOZ62_030041 [Perkinsus olseni] diamond 1650 105 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;