RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA950981", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA950981 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26677049 26677049 PRJNA950981_P_NODE_21701_length_242_cov_0.923077_g21525_i0 PRJNA950981 21701 242 0.923077 2.23384634 Streblomastix strix 222440 Preaxostyla other_Eukaryota 60.1 2.54e-8   NR KAA6388360.1 222440 g21525 i0 41.7 8.33057851239669 84 43 97.9 2 5 241 129 211 KAA6388360.1 MAG: putative Tau-tubulin kinase 2 [Streblomastix strix] diamond 2016 60.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
32080233 32080233 PRJNA950981_P_NODE_7618_length_360_cov_1.358885_g7442_i0 PRJNA950981 7618 360 1.358885 4.891986 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 85.5 1.55e-16   NR KAJ4460625.1 342808 g7442 i0 38.4 0.825 99 61 82.5 0 307 11 773 871 KAJ4460625.1 putative AP-2 complex subunit alpha-1 [Paratrimastix pyriformis] diamond 297 85.5 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
32806804 32806804 PRJNA950981_P_NODE_21280_length_243_cov_0.917647_g21104_i0 PRJNA950981 21280 243 0.917647 2.22988221 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 105 2.65e-25   NR KAJ4454729.1 342808 g21104 i0 58.2 0.975308641975309 79 33 97.5 0 5 241 20 98 KAJ4454729.1 putative preimplantation protein 3 [Paratrimastix pyriformis] diamond 237 105 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
32806806 32806806 PRJNA950981_P_NODE_7040_length_372_cov_1.043478_g6864_i0 PRJNA950981 7040 372 1.043478 3.88173816 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 55.5 5.55e-6   NR KAJ4458289.1 342808 g6864 i0 44.4 0.508064516129032 63 35 50.8 0 62 250 146 208 KAJ4458289.1 putative inositol 5-phosphatase 1 [Paratrimastix pyriformis] diamond 189 55.5 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;