RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA950981", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA950981 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27884983 27884983 PRJNA950981_P_NODE_21025_length_243_cov_0.917647_g20849_i0 PRJNA950981 21025 243 0.917647 2.22988221 root 1 Root_unresolved Root_unresolved 55.5 7.56e-8   NR XP_067779437.1 135588 g20849 i0 49.1 3.12345679012346 53 26 64.2 1 4 159 11 63 XP_067779437.1 ribosomal protein L36e [Histomonas meleagridis] diamond 759 55.8 0.99462365591397806 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31479465 31479465 PRJNA950981_P_NODE_12796_length_287_cov_2.205607_g12620_i0 PRJNA950981 12796 287 2.205607 6.33009209 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 88.2 2.22e-19   NR XP_068360038.1 1144522 g12620 i0 51.2 0.898954703832753 86 42 89.9 0 286 29 92 177 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 258 88.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;