RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA950981" and tax_clade = "Haptista"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 9 ✖

bioproject 1

  • PRJNA950981 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2209152 2209152 PRJNA950981_P_NODE_17142_length_252_cov_0.871508_g16966_i0 PRJNA950981 17142 252 0.871508 2.19620016 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 141 4.74e-29   NTclustered gi|551604089|ref|XM_005783475.1| 280463 g16966 i0 79.803 7.57142857142857 203 33 79 7 9 207 877 679 Emiliania huxleyi CCMP1516 calreticulin (CRT-1), mRNA blastn 1908 141 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
14961682 14961682 PRJNA950981_P_NODE_5992_length_400_cov_1.400612_g5816_i0 PRJNA950981 5992 400 1.400612 5.602448 Dicrateria rotunda 2703868 Haptophyta other_Eukaryota 350 1.2100000000000003e-91   NTclustered gi|259419544|emb|FN392559.1| 2703868 g5816 i0 84.971 84.7375 346 50 86 2 55 399 45 389 Imantonia rotunda partial mRNA for ADP-ribosylation factor 3, contig 10068 blastn 33895 350 1 Eukaryota Haptista   Haptophyta   Isochrysidales Isochrysidaceae Dicrateria Dicrateria rotunda
18785636 18785636 PRJNA950981_P_NODE_5415_length_418_cov_7.492754_g5239_i0 PRJNA950981 5415 418 7.492754 31.31971172 Prymnesium parvum 97485 Haptophyta other_Eukaryota 213 2.1499999999999996e-68   NR KAL1515397.1 97485 g5239 i0 78 1.82296650717703 127 28 91.1 0 382 2 1 127 KAL1515397.1 hypothetical protein AB1Y20_002025 [Prymnesium parvum] diamond 762 213 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
27443299 27443299 PRJNA950981_P_NODE_7823_length_356_cov_1.636042_g7647_i0 PRJNA950981 7823 356 1.636042 5.82430952 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.8 6.34e-7   NR KAL1521096.1 97485 g7647 i0 48.3 2.2752808988764 118 61 99.4 0 355 2 69 186 KAL1521096.1 hypothetical protein AB1Y20_022650 [Prymnesium parvum] diamond 810 57.8 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
28667940 28667940 PRJNA950981_P_NODE_7347_length_365_cov_2.636986_g7171_i0 PRJNA950981 7347 365 2.636986 9.6249989 Emiliania huxleyi CCMP1516 280463 Haptophyta other_Eukaryota 87.4 1.76e-19   NR XP_005782836.1 280463 g7171 i0 51 0.805479452054795 98 44 79.7 2 28 318 20 114 XP_005782836.1 hypothetical protein EMIHUDRAFT_442529 [Emiliania huxleyi CCMP1516] diamond 294 87.4 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
28762418 28762418 PRJNA950981_P_NODE_7887_length_355_cov_1.439716_g7711_i0 PRJNA950981 7887 355 1.439716 5.1109918 Prymnesium sp. 2812485 Haptophyta other_Eukaryota 45.4 0.0155   NR KAL3933104.1 2812485 g7711 i0 38.6 0.48169014084507 57 34 47.3 1 299 132 3639 3695 KAL3933104.1 MAG: hypothetical protein SGPRY_000430, partial [Prymnesium sp.] diamond 171 45.4 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium sp.
30468186 30468186 PRJNA950981_P_NODE_10993_length_308_cov_1.327660_g10817_i0 PRJNA950981 10993 308 1.32766 4.0891928 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 58.2 1.71e-7   NR KAG8460833.1 2081491 g10817 i0 46.7 1.16883116883117 60 32 58.4 0 181 2 1 60 KAG8460833.1 hypothetical protein KFE25_010888 [Diacronema lutheri] diamond 360 58.2 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
31099651 31099651 PRJNA950981_P_NODE_14895_length_267_cov_1.608247_g14719_i0 PRJNA950981 14895 267 1.608247 4.29401949 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 52 2.32e-5   NR KAJ1635446.1 483367 g14719 i0 53.2 0.528089887640449 47 20 50.6 1 1 135 138 184 KAJ1635446.1 hypothetical protein T492DRAFT_902623 [Pavlovales sp. CCMP2436] diamond 141 52 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436
32428462 32428462 PRJNA950981_P_NODE_7919_length_354_cov_1.665480_g7743_i0 PRJNA950981 7919 354 1.66548 5.8957992 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 127 3.2399999999999996e-32   NR KAG8466613.1 2081491 g7743 i0 54.1 0.940677966101695 111 45 93.2 4 353 24 269 374 KAG8466613.1 hypothetical protein KFE25_007992 [Diacronema lutheri] diamond 333 127 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;