RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA950981", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 17 ✖

tax_clade 1

  • Discoba · 17 ✖

bioproject 1

  • PRJNA950981 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13687494 13687494 PRJNA950981_P_NODE_16331_length_254_cov_1.292818_g16155_i0 PRJNA950981 16331 254 1.292818 3.28375772 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 464 2.4999999999999994e-126   NTclustered gi|41400287|gb|AY425023.1| 127150 g16155 i0 99.606 86.2362204724409 254 1 100 0 1 254 1527 1780 Rhynchomonas nasuta strain ATCC 50105 18S ribosomal RNA gene, partial sequence blastn 21904 464 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
13687498 13687498 PRJNA950981_P_NODE_16931_length_252_cov_0.871508_g16755_i0 PRJNA950981 16931 252 0.871508 2.19620016 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 239 1.6300000000000002e-58   NTclustered gi|686635994|ref|XM_009312168.1| 71804 g16755 i0 83.794 3.8452380952381 253 39 100 2 1 252 258 7 Trypanosoma grayi putative 60S ribosomal protein L12 partial mRNA blastn 969 239 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
14961679 14961679 PRJNA950981_P_NODE_3612_length_505_cov_1.835648_g3437_i0 PRJNA950981 3612 505 1.835648 9.2700224 Neobodo designis 312471 Euglenozoa other_Eukaryota 761 0   NTclustered gi|62871458|gb|AY998645.1| 312471 g3437 i0 93.886 102.257425742574 507 27 100 4 1 505 868 1372 Neobodo designis strain SCCAP BD51 18S ribosomal RNA gene, partial sequence blastn 51640 761 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
17512039 17512039 PRJNA950981_P_NODE_21294_length_243_cov_0.917647_g21118_i0 PRJNA950981 21294 243 0.917647 2.22988221 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 128 3.32e-32   NR KAF5224952.1 5693 g21118 i0 70.4 72.8024691358025 81 24 100 0 1 243 117 197 KAF5224952.1 hypothetical protein ECC02_001885 [Trypanosoma cruzi] diamond 17691 129 0.992248062015504 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
18785637 18785637 PRJNA950981_P_NODE_5995_length_400_cov_1.382263_g5819_i0 PRJNA950981 5995 400 1.382263 5.529052 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 577 5.109999999999999e-160   NTclustered gi|1996609220|gb|MW694339.1| 127150 g5819 i0 92.786 74.8675 402 24 100 4 1 400 790 392 Rhynchomonas nasuta isolate G431 small subunit ribosomal RNA gene, partial sequence blastn 29947 577 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
19113850 19113850 PRJNA950981_P_NODE_1095_length_877_cov_2.080846_g959_i0 PRJNA950981 1095 877 2.080846 18.24901942 Euglenozoa 33682 Euglenozoa other_Eukaryota 88.2 2.22e-15   NR XP_029229603.1 83891 g959 i0 32.8 3.66704675028506 198 114 66.7 5 780 196 706 887 XP_029229603.1 putative subtilisin-like serine peptidase [Trypanosoma conorhini] diamond 3216 88.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
22940251 22940251 PRJNA950981_P_NODE_13078_length_285_cov_0.844340_g12902_i0 PRJNA950981 13078 285 0.84434 2.406369 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 300 8.52e-77   NTclustered gi|440222375|gb|JX030043.1| 5659 g12902 i0 85.714 127.087719298246 294 30 100 10 1 285 1750 1460 Leishmania amazonensis isolate LaPH8.rRNA.13 28S ribosomal RNA (LSU-alpha), partial sequence blastn 36220 300 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
28225501 28225501 PRJNA950981_P_NODE_20626_length_244_cov_0.912281_g20450_i0 PRJNA950981 20626 244 0.912281 2.22596564 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 114 3.16e-28   NR KAJ9452460.1 91374 g20450 i0 68.4 3.77459016393443 76 24 93.4 0 15 242 6 81 KAJ9452460.1 GDP-mannose 3 [Diplonema papillatum] diamond 921 114 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
28793915 28793915 PRJNA950981_P_NODE_16047_length_256_cov_2.546448_g15871_i0 PRJNA950981 16047 256 2.546448 6.51890688 Phytomonas sp. Hart1 223615 Euglenozoa other_Eukaryota 100 2.87e-22   NR CCW71629.1 223615 g15871 i0 58.3 4.921875 84 35 98.4 0 254 3 2079 2162 CCW71629.1 unnamed protein product [Phytomonas sp. Hart1] diamond 1260 100 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. Hart1
28920199 28920199 PRJNA950981_P_NODE_14808_length_268_cov_1.225641_g14632_i0 PRJNA950981 14808 268 1.225641 3.28471788 Bodo saltans 75058 Euglenozoa other_Eukaryota 146 5.27e-41   NR CUG87343.1 75058 g14632 i0 78.7 4.98134328358209 89 19 99.6 0 2 268 198 286 CUG87343.1 short chain 3-hydroxyacyl-CoA dehydrogenase, putative [Bodo saltans] diamond 1335 146 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30214971 30214971 PRJNA950981_P_NODE_20152_length_245_cov_0.906977_g19976_i0 PRJNA950981 20152 245 0.906977 2.22209365 Bodo saltans 75058 Euglenozoa other_Eukaryota 73.9 3.84e-13   NR CUG86792.1 75058 g19976 i0 44.6 0.906122448979592 74 34 82 2 232 32 38 111 CUG86792.1 carboxylesterase-like, putative [Bodo saltans] diamond 222 73.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30278696 30278696 PRJNA950981_P_NODE_18872_length_248_cov_0.891429_g18696_i0 PRJNA950981 18872 248 0.891429 2.21074392 Bodo saltans 75058 Euglenozoa other_Eukaryota 50.1 8.49e-6   NR CUG87592.1 75058 g18696 i0 44.2 1.01612903225806 43 24 52 0 246 118 33 75 CUG87592.1 Ca2+-binding protein, putative [Bodo saltans] diamond 252 50.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30853590 30853590 PRJNA950981_P_NODE_19734_length_246_cov_0.901734_g19558_i0 PRJNA950981 19734 246 0.901734 2.21826564 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 78.6 5.45e-16   NR CCM17058.1 5670 g19558 i0 64.8 4.96341463414634 54 19 65.9 0 162 1 117 170 CCM17058.1 40S ribosomal protein S29, putative (fragment) [Leishmania guyanensis] diamond 1221 78.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania guyanensis
31985277 31985277 PRJNA950981_P_NODE_21578_length_242_cov_0.923077_g21402_i0 PRJNA950981 21578 242 0.923077 2.23384634 Phytomonas sp. Hart1 223615 Euglenozoa other_Eukaryota 88.6 2.76e-18   NR CCW71629.1 223615 g21402 i0 50 0.991735537190083 80 34 91.7 1 19 240 1881 1960 CCW71629.1 unnamed protein product [Phytomonas sp. Hart1] diamond 240 88.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. Hart1
32245409 32245409 PRJNA950981_P_NODE_18518_length_249_cov_0.886364_g18342_i0 PRJNA950981 18518 249 0.886364 2.20704636 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99 6.32e-22   NR WJH19551.1 3039 g18342 i0 62.5 4.87951807228916 80 27 92.8 1 233 3 398 477 WJH19551.1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 [Euglena gracilis] diamond 1215 100 0.99 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
32586631 32586631 PRJNA950981_P_NODE_15579_length_261_cov_0.925532_g15403_i0 PRJNA950981 15579 261 0.925532 2.41563852 Euglena gracilis 3039 Euglenozoa other_Eukaryota 115 8.49e-28   NR WMV69947.1 3039 g15403 i0 70.8 0.827586206896552 72 21 82.8 0 216 1 251 322 WMV69947.1 ATP-dependent RNA helicase DDX3 [Euglena gracilis] diamond 216 115 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
32907787 32907787 PRJNA950981_P_NODE_16220_length_255_cov_1.285714_g16044_i0 PRJNA950981 16220 255 1.285714 3.2785707 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 3.48e-25   NR QLA09626.1 3039 g16044 i0 63.2 9.95294117647059 76 28 89.4 0 6 233 90 165 QLA09626.1 60S large subunit ribosomal protein eL22 [Euglena gracilis] diamond 2538 102 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;