RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA950981", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 9 ✖

tax_clade 1

  • Bacteria candidate phyla · 9 ✖

bioproject 1

  • PRJNA950981 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26645472 26645472 PRJNA950981_P_NODE_3221_length_535_cov_1.181818_g3047_i0 PRJNA950981 3221 535 1.181818 6.3227263 Minisyncoccota bacterium 2053589 Bacteria Bacteria 114 1.37e-25   NR MEZ0208986.1 2053589 g3047 i0 36.4 0.986915887850467 176 109 98.7 1 534 7 1313 1485 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 528 114 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
26962113 26962113 PRJNA950981_P_NODE_17122_length_252_cov_0.871508_g16946_i0 PRJNA950981 17122 252 0.871508 2.19620016 Minisyncoccota bacterium 2053589 Bacteria Bacteria 59.7 2.41e-8   NR MEZ0208896.1 2053589 g16946 i0 43.9 0.976190476190476 82 43 97.6 2 250 5 131 209 MEZ0208896.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 246 59.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27941681 27941681 PRJNA950981_P_NODE_9065_length_335_cov_1.190840_g8889_i0 PRJNA950981 9065 335 1.19084 3.989314 Minisyncoccota bacterium 2053589 Bacteria Bacteria 78.6 3.06e-14   NR MEZ0208986.1 2053589 g8889 i0 39.6 0.904477611940299 101 60 90.4 1 318 16 800 899 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 303 78.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28193977 28193977 PRJNA950981_P_NODE_5286_length_423_cov_1.777143_g5110_i0 PRJNA950981 5286 423 1.777143 7.51731489 Minisyncoccota bacterium 2053589 Bacteria Bacteria 90.9 4.25e-18   NR MEZ0208986.1 2053589 g5110 i0 40 0.815602836879433 115 69 81.6 0 418 74 1377 1491 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 345 90.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28762417 28762417 PRJNA950981_P_NODE_20407_length_245_cov_0.877907_g20231_i0 PRJNA950981 20407 245 0.877907 2.15087215 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.1 8.38e-6   NR MEZ0208986.1 2053589 g20231 i0 40 0.979591836734694 80 48 98 0 244 5 1243 1322 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 240 53.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28920200 28920200 PRJNA950981_P_NODE_15568_length_261_cov_1.234043_g15392_i0 PRJNA950981 15568 261 1.234043 3.22085223 Minisyncoccota bacterium 2053589 Bacteria Bacteria 54.3 3.98e-6   NR MEZ0208986.1 2053589 g15392 i0 43.3 1.03448275862069 90 41 97.7 3 260 6 1240 1324 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 270 54.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29425352 29425352 PRJNA950981_P_NODE_19949_length_246_cov_0.901734_g19773_i0 PRJNA950981 19949 246 0.901734 2.21826564 Minisyncoccota bacterium 2053589 Bacteria Bacteria 67.8 5.86e-11   NR MEZ0208986.1 2053589 g19773 i0 45.6 0.963414634146341 79 42 96.3 1 2 238 1097 1174 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 237 67.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31131146 31131146 PRJNA950981_P_NODE_7975_length_353_cov_1.114286_g7799_i0 PRJNA950981 7975 353 1.114286 3.93342958 Minisyncoccota bacterium 2053589 Bacteria Bacteria 111 1.3e-25   NR MEZ0208986.1 2053589 g7799 i0 56 0.926345609065156 109 44 90.9 2 32 352 1273 1379 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 327 111 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32460119 32460119 PRJNA950981_P_NODE_20919_length_243_cov_1.835294_g20743_i0 PRJNA950981 20919 243 1.835294 4.45976442 Minisyncoccota bacterium 2053589 Bacteria Bacteria 62.4 4.63e-9   NR MEZ0208986.1 2053589 g20743 i0 35.1 0.950617283950617 77 50 95.1 0 240 10 950 1026 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 231 62.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;