contig_metadata
5 rows where bioproject = "PRJNA949785", tax_phylum = "Thermodesulfobacteriota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2208468 | 2208468 | PRJNA949785_P_NODE_16942_length_247_cov_0.885057_g16745_i0 | PRJNA949785 | 16942 | 247 | 0.885057 | 2.18609079 | Desulfatibacillum aliphaticivorans | 218208 | Bacteria | Bacteria | 206 | 1.6199999999999998e-48 | NTclustered | gi|218759244|gb|CP001322.1| | 218208 | g16745 | i0 | 83.333 | 9.39676113360324 | 222 | 37 | 90 | 0 | 6 | 227 | 4568541 | 4568762 | Desulfatibacillum aliphaticivorans strain AK-01, complete genome | blastn | 2321 | 206 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfatibacillaceae | Desulfatibacillum | Desulfatibacillum aliphaticivorans | ||
| 18784922 | 18784922 | PRJNA949785_P_NODE_16135_length_249_cov_0.875000_g15938_i0 | PRJNA949785 | 16135 | 249 | 0.875 | 2.17875 | Desulfatibacillum aliphaticivorans | 218208 | Bacteria | Bacteria | 132 | 2.81e-26 | NTclustered | gi|218759244|gb|CP001322.1| | 218208 | g15938 | i0 | 76.613 | 2.39759036144578 | 248 | 53 | 98 | 5 | 1 | 245 | 5925566 | 5925811 | Desulfatibacillum aliphaticivorans strain AK-01, complete genome | blastn | 597 | 132 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfatibacillaceae | Desulfatibacillum | Desulfatibacillum aliphaticivorans | ||
| 29551625 | 29551625 | PRJNA949785_P_NODE_18350_length_243_cov_0.905882_g18153_i0 | PRJNA949785 | 18350 | 243 | 0.905882 | 2.20129326 | Desulfohalobiaceae bacterium | 2683721 | Bacteria | Bacteria | 132 | 7.31e-35 | NR | MEF8943003.1 | 2683721 | g18153 | i0 | 85.2 | 1 | 81 | 12 | 100 | 0 | 243 | 1 | 328 | 408 | MEF8943003.1 thiamine pyrophosphate-dependent enzyme [Desulfohalobiaceae bacterium] | diamond | 243 | 132 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfohalobiaceae | Desulfohalobiaceae bacterium | |||
| 30380063 | 30380063 | PRJNA949785_P_NODE_5692_length_468_cov_1.037975_g5495_i0 | PRJNA949785 | 5692 | 468 | 1.037975 | 4.857723 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 134 | 1.99e-34 | NR | WP_035266092.1 | 933262 | g5495 | i0 | 55.8 | 2.17307692307692 | 113 | 49 | 71.8 | 1 | 348 | 13 | 9 | 121 | WP_035266092.1 RNA-guided endonuclease InsQ/TnpB family protein [Desulfosarcina sp. BuS5] | diamond | 1017 | 134 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfosarcina | Desulfosarcina sp. BuS5 | ||
| 32806773 | 32806773 | PRJNA949785_P_NODE_16980_length_247_cov_0.885057_g16783_i0 | PRJNA949785 | 16980 | 247 | 0.885057 | 2.18609079 | Desulfohalobiaceae bacterium | 2683721 | Bacteria | Bacteria | 102 | 4.28e-26 | NR | MEF8823381.1 | 2683721 | g16783 | i0 | 95.8 | 0.582995951417004 | 48 | 2 | 58.3 | 0 | 145 | 2 | 1 | 48 | MEF8823381.1 hypothetical protein [Desulfohalobiaceae bacterium] | diamond | 144 | 102 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfohalobiaceae | Desulfohalobiaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;