RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA949785" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA949785 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29330762 29330762 PRJNA949785_P_NODE_19109_length_241_cov_0.916667_g18912_i0 PRJNA949785 19109 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 51.6 1.49e-5   NR MFA5652201.1 2053589 g18912 i0 57.1 0.435684647302905 35 15 43.6 0 115 11 1 35 MFA5652201.1 ribonuclease HII [Candidatus Paceibacterota bacterium] diamond 105 51.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29899300 29899300 PRJNA949785_P_NODE_18591_length_242_cov_0.911243_g18394_i0 PRJNA949785 18591 242 0.911243 2.20520806 Minisyncoccota bacterium 2053589 Bacteria Bacteria 87.4 9e-19   NR MEX1014820.1 2053589 g18394 i0 55.6 2.00826446280992 81 33 97.9 2 6 242 17 96 MEX1014820.1 DUF5667 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 486 87.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;