RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA949785", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA949785 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
933136 933136 PRJNA949785_P_NODE_14901_length_257_cov_1.673913_g14704_i0 PRJNA949785 14901 257 1.673913 4.30195641 Eriocheir sinensis alphatetra-like virus 3022104 Viruses Viruses 459 1.18e-124   NTclustered gi|2430285571|gb|OP019089.1| 3022104 g14704 i0 98.833 1 257 3 100 0 1 257 9402 9658 MAG: Eriocheir sinensis alphatetra-like virus isolate Tangshan, Hebei genomic sequence blastn 257 459 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Alphatetraviridae   Eriocheir sinensis alphatetra-like virus
29621103 29621103 PRJNA949785_P_NODE_17250_length_246_cov_0.890173_g17053_i0 PRJNA949785 17250 246 0.890173 2.18982558 Potexvirus 12176 Viruses Viruses 86.3 1.94e-17   NR BDG15104.1 12177 g17053 i0 80 2.4390243902439 50 10 61 0 1 150 1033 1082 BDG15104.1 RNA-dependent RNA polymerase [Clover yellow mosaic virus] diamond 600 86.3 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus flavitrifolii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;