RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA949785" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA949785 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6036330 6036330 PRJNA949785_P_NODE_18325_length_243_cov_0.905882_g18128_i0 PRJNA949785 18325 243 0.905882 2.20129326 Trypanosoma rangeli SC58 429131 Euglenozoa other_Eukaryota 118 1.7999999999999998e-31   NR ESL09109.1 429131 g18128 i0 76.4 0.888888888888889 72 17 88.9 0 1 216 111 182 ESL09109.1 large subunit ribosomal protein L11e [Trypanosoma rangeli SC58] diamond 216 118 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
26772331 26772331 PRJNA949785_P_NODE_361_length_1675_cov_6.397004_g314_i0 PRJNA949785 361 1675 6.397004 107.149817 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 225 1.11e-61   NR KAJ9461372.1 91374 g314 i0 29.7 0.99044776119403 553 325 90.1 15 82 1590 91 629 KAJ9461372.1 Proline dehydrogenase 1 [Diplonema papillatum] diamond 1659 225 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
27695875 27695875 PRJNA949785_P_NODE_13904_length_269_cov_2.989796_g13707_i0 PRJNA949785 13904 269 2.989796 8.04255124 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 88.6 1.09e-18   NR KAG8339691.1 5699 g13707 i0 42 6.86988847583643 88 51 98.1 0 2 265 226 313 KAG8339691.1 putative GDP-L-fucose synthetase [Trypanosoma vivax] diamond 1848 88.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;