RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA949785", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA949785 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2208501 2208501 PRJNA949785_P_NODE_2042_length_827_cov_15.112732_g950_i1 PRJNA949785 2042 827 15.112732 124.98229364 Spiroplasma endosymbiont of Diplazon laetatorius 3066322 Bacteria Bacteria 54.7 0.023   NTclustered gi|2706542397|emb|OZ026458.1| 3066322 g950 i1 100 0.0350665054413543 29 0 4 0 640 668 461292 461320 Spiroplasma endosymbiont of Diplazon laetatorius isolate 54808 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma endosymbiont of Diplazon laetatorius
7639937 7639937 PRJNA949785_P_NODE_13486_length_275_cov_1.346535_g13289_i0 PRJNA949785 13486 275 1.346535 3.70297125 Mollicutes 31969 Bacteria Bacteria 488 1.6299999999999995e-133   NTclustered gi|1958638505|gb|MW498314.1| 2100 g13289 i0 99.259 101.687272727273 270 2 98 0 1 270 1280 1011 Mesomycoplasma hyorhinis strain MycSu128 23S ribosomal RNA gene, partial sequence blastn 27964 488 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma hyorhinis
11136849 11136849 PRJNA949785_P_NODE_6089_length_448_cov_3.744000_g5892_i0 PRJNA949785 6089 448 3.744 16.77312 Acholeplasmataceae bacterium 1898209 Bacteria Bacteria 176 1.15e-51   NR MDO9628701.1 1898209 g5892 i0 63.5 1.640625 126 45 83.7 1 4 378 149 274 MDO9628701.1 hypothetical protein [Acholeplasmataceae bacterium] diamond 735 176 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae   Acholeplasmataceae bacterium
17511288 17511288 PRJNA949785_P_NODE_1054_length_1142_cov_12.556595_g950_i0 PRJNA949785 1054 1142 12.556595 143.3963149 Spiroplasma endosymbiont of Diplazon laetatorius 3066322 Bacteria Bacteria 54.7 0.032   NTclustered gi|2706542397|emb|OZ026458.1| 3066322 g950 i0 100 0.0253940455341506 29 0 3 0 955 983 461292 461320 Spiroplasma endosymbiont of Diplazon laetatorius isolate 54808 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma endosymbiont of Diplazon laetatorius

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;