RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where bioproject = "PRJNA949785" and tax_clade = "Sar"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 30 ✖

bioproject 1

  • PRJNA949785 · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3814090 3814090 PRJNA949785_P_NODE_8543_length_361_cov_0.725694_g8346_i0 PRJNA949785 8543 361 0.725694 2.61975534 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 640 5.739999999999999e-179   NTclustered gi|14495562|gb|L21708.2|PFA34K 5821 g8346 i0 98.615 100 361 5 100 0 1 361 908 1268 Plasmodium berghei p23-like protein mRNA, partial cds blastn 36100 645 0.992248062015504 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
12741340 12741340 PRJNA949785_P_NODE_7050_length_407_cov_1.934132_g6853_i0 PRJNA949785 7050 407 1.934132 7.87191724 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.039   NTclustered gi|915128644|ref|XM_013479421.1| 5804 g6853 i0 88.636 0.245700245700246 44 3 11 2 287 329 3256 3214 Eimeria maxima hypothetical protein partial mRNA blastn 100 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
13686793 13686793 PRJNA949785_P_NODE_12671_length_285_cov_1.452830_g12474_i0 PRJNA949785 12671 285 1.45283 4.1405655 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 158 8.770000000000001e-44   NR RMX65694.1 542832 g12474 i0 78.9 35.0421052631579 90 19 94.7 0 16 285 288 377 RMX65694.1 hypothetical protein DD238_004047 [Peronospora effusa] diamond 9987 158 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora effusa
13686816 13686816 PRJNA949785_P_NODE_14651_length_260_cov_2.016043_g14454_i0 PRJNA949785 14651 260 2.016043 5.2417118 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 124 5.66e-31   NR XP_725288.1 5861 g14454 i0 73.1 19.0038461538462 78 21 90 0 235 2 377 454 XP_725288.1 uncharacterized protein PY17X_1143800 [Plasmodium yoelii] diamond 4941 125 0.992 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
17511291 17511291 PRJNA949785_P_NODE_11134_length_308_cov_1.421277_g10937_i0 PRJNA949785 11134 308 1.421277 4.37753316 Cryptosporidium ubiquitum 857276 SAR_Eukaryotes SAR_Eukaryotes 130 1.29e-25   NTclustered gi|1624735278|ref|XM_029020408.1| 857276 g10937 i0 75.824 1.77597402597403 273 57 87 8 41 308 394 662 Cryptosporidium ubiquitum vacuolar ATP synthase subunit B (cubi_03395), partial mRNA blastn 547 130 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ubiquitum
21335213 21335213 PRJNA949785_P_NODE_11137_length_308_cov_1.310638_g10940_i0 PRJNA949785 11137 308 1.310638 4.03676504 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 205 9.12e-59   NR CBN74629.1 2880 g10940 i0 97.1 616.704545454545 102 3 99.4 0 307 2 1575 1676 CBN74629.1 similar to splicing factor Prp8 [Ectocarpus siliculosus] diamond 189945 207 0.990338164251208 Eukaryota Sar     Phaeophyceae Ectocarpales Ectocarpaceae Ectocarpus Ectocarpus siliculosus
26867532 26867532 PRJNA949785_P_NODE_18381_length_243_cov_0.905882_g18184_i0 PRJNA949785 18381 243 0.905882 2.20129326 Vitrella brassicaformis CCMP3155 1169540 SAR_Eukaryotes SAR_Eukaryotes 77 3.21e-14   NR CEM26923.1 1169540 g18184 i0 50.7 0.901234567901235 73 35 90.1 1 25 243 311 382 CEM26923.1 unnamed protein product [Vitrella brassicaformis CCMP3155] diamond 219 77 1 Eukaryota Sar         Vitrellaceae Vitrella Vitrella brassicaformis
26905631 26905631 PRJNA949785_P_NODE_5341_length_485_cov_2.516990_g5144_i0 PRJNA949785 5341 485 2.51699 12.2074015 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 76.6 7.25e-13   NR GMI11570.1 1606542 g5144 i0 30.1 2.15876288659794 176 104 97.7 4 483 10 251 425 GMI11570.1 hypothetical protein TrVE_jg8546 [Triparma verrucosa] diamond 1047 76.6 1 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Triparma Triparma verrucosa
26930616 26930616 PRJNA949785_P_NODE_12142_length_292_cov_1.757991_g11945_i0 PRJNA949785 12142 292 1.757991 5.13333372 Symbiodinium pilosum 2952 SAR_Eukaryotes SAR_Eukaryotes 90.5 3.7e-20   NR CAE7688367.1 2952 g11945 i0 44.2 3.9041095890411 95 53 97.6 0 286 2 73 167 CAE7688367.1 ypt-1, partial [Symbiodinium pilosum] diamond 1140 90.5 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium pilosum
27341768 27341768 PRJNA949785_P_NODE_14363_length_264_cov_1.209424_g14166_i0 PRJNA949785 14363 264 1.209424 3.19287936 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 68.2 5.36e-11   NR OMJ89000.1 5963 g14166 i0 43.7 0.988636363636364 87 37 97.7 3 6 263 180 255 OMJ89000.1 hypothetical protein SteCoe_8915 [Stentor coeruleus] diamond 261 68.2 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
27689364 27689364 PRJNA949785_P_NODE_4024_length_575_cov_1.221116_g3833_i0 PRJNA949785 4024 575 1.221116 7.021417 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 72 6.45e-11   NR MES1914861.1 1215613 g3833 i0 40.9 1.0695652173913 88 52 45.9 0 574 311 293 380 MES1914861.1 hypothetical protein [Cercozoa sp. M6MM] diamond 615 72 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
27759013 27759013 PRJNA949785_P_NODE_5724_length_466_cov_1.175573_g5527_i0 PRJNA949785 5724 466 1.175573 5.47817018 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 186 4.15e-51   NR XP_024582843.1 4781 g5527 i0 58.9 17.3369098712446 146 54 94 2 20 457 226 365 XP_024582843.1 phenylalanine-trna ligase [Plasmopara halstedii] diamond 8079 187 0.994652406417112 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
28004941 28004941 PRJNA949785_P_NODE_19025_length_241_cov_0.916667_g18828_i0 PRJNA949785 19025 241 0.916667 2.20916747 Tribonema minus 303371 SAR_Eukaryotes SAR_Eukaryotes 82.8 5.46e-17   NR KAG5184629.1 303371 g18828 i0 71.4 3.79668049792531 49 14 61 0 154 8 1 49 KAG5184629.1 hypothetical protein JKP88DRAFT_47524 [Tribonema minus] diamond 915 82.8 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema minus
28036392 28036392 PRJNA949785_P_NODE_3505_length_621_cov_2.284672_g3322_i0 PRJNA949785 3505 621 2.284672 14.18781312 Paramecium primaurelia 5886 SAR_Eukaryotes SAR_Eukaryotes 205 2.1e-62   NR CAD8068969.1 5886 g3322 i0 56.8 3.54589371980676 183 73 88.4 2 612 64 95 271 CAD8068969.1 unnamed protein product [Paramecium primaurelia] diamond 2202 205 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
28067803 28067803 PRJNA949785_P_NODE_12725_length_284_cov_1.739336_g12528_i0 PRJNA949785 12725 284 1.739336 4.93971424 Cylindrotheca closterium 2856 SAR_Eukaryotes SAR_Eukaryotes 88.2 1.19e-18   NR CAJ1957893.1 2856 g12528 i0 47 0.876760563380282 83 43 86.6 1 246 1 46 128 CAJ1957893.1 unnamed protein product [Cylindrotheca closterium] diamond 249 88.2 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
28225480 28225480 PRJNA949785_P_NODE_4126_length_566_cov_2.977688_g3935_i0 PRJNA949785 4126 566 2.977688 16.85371408 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 64.3 3.03e-8   NR XP_029216214.1 94643 g3935 i0 25 1.01766784452297 192 127 94.3 5 556 23 271 459 XP_029216214.1 LETM1 family protein [Besnoitia besnoiti] diamond 576 64.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
28415327 28415327 PRJNA949785_P_NODE_6266_length_440_cov_4.738420_g6069_i0 PRJNA949785 6266 440 4.73842 20.849048 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 103 5.539999999999999e-23   NR CAG9327468.1 1481888 g6069 i0 39.7 1.78636363636364 131 79 89.3 0 2 394 53 183 CAG9327468.1 unnamed protein product [Blepharisma stoltei] diamond 786 103 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
28453491 28453491 PRJNA949785_P_NODE_16926_length_247_cov_0.885057_g16729_i0 PRJNA949785 16926 247 0.885057 2.18609079 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 97.8 6.25e-22   NR XP_001007105.2 312017 g16729 i0 67.6 1.60323886639676 68 21 82.6 1 234 31 314 380 XP_001007105.2 CAMP-dependent kinase, regulatory protein [Tetrahymena thermophila SB210] diamond 396 97.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
28509930 28509930 PRJNA949785_P_NODE_16907_length_247_cov_0.885057_g16710_i0 PRJNA949785 16907 247 0.885057 2.18609079 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 47.8 6.69e-4   NR KAJ1409783.1 483371 g16710 i0 41.5 0.789473684210526 65 36 78.9 1 198 4 194 256 KAJ1409783.1 ankyrin repeat-containing domain protein [Ochromonadaceae sp. CCMP2298] diamond 195 47.8 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
28541675 28541675 PRJNA949785_P_NODE_11727_length_298_cov_2.053333_g11530_i0 PRJNA949785 11727 298 2.053333 6.11893234 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00475   NR GBG31126.1 2315210 g11530 i0 32.6 0.926174496644295 92 55 87.6 3 274 14 18 107 GBG31126.1 Cystatin-A2 [Hondaea fermentalgiana] diamond 276 44.7 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
28825376 28825376 PRJNA949785_P_NODE_4308_length_551_cov_1.487448_g4113_i0 PRJNA949785 4308 551 1.487448 8.19583848 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 67.8 1.08e-9   NR XP_028865435.1 189622 g4113 i0 46.3 0.73502722323049 67 35 35.9 1 294 97 2 68 XP_028865435.1 PP-loop family protein [Babesia ovata] diamond 405 67.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
29204689 29204689 PRJNA949785_P_NODE_13869_length_270_cov_1.360406_g13672_i0 PRJNA949785 13869 270 1.360406 3.6730962 Ectocarpus siliculosus 2880 SAR_Eukaryotes SAR_Eukaryotes 50.1 1.29e-4   NR CBJ28917.1 2880 g13672 i0 53.1 0.544444444444444 49 19 52.2 3 142 2 34 80 CBJ28917.1 conserved unknown protein [Ectocarpus siliculosus] diamond 147 50.1 1 Eukaryota Sar     Phaeophyceae Ectocarpales Ectocarpaceae Ectocarpus Ectocarpus siliculosus
29274105 29274105 PRJNA949785_P_NODE_11669_length_299_cov_1.796460_g11472_i0 PRJNA949785 11669 299 1.79646 5.3714154 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 101 1.45e-22   NR DAZ99136.1 4803 g11472 i0 50.5 30.7926421404682 95 47 95.3 0 15 299 383 477 DAZ99136.1 TPA: hypothetical protein N0F65_010220 [Lagenidium giganteum] diamond 9207 101 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
29305741 29305741 PRJNA949785_P_NODE_3729_length_599_cov_4.119772_g3543_i0 PRJNA949785 3729 599 4.119772 24.67743428 Tetraparma 2962634 SAR_Eukaryotes SAR_Eukaryotes 145 5.36e-40   NR GMI20464.1 2962635 g3543 i0 47.7 1.51752921535893 153 64 71.1 4 111 536 57 204 GMI20464.1 hypothetical protein TeGR_g14236 [Tetraparma gracilis] diamond 909 146 0.993150684931507 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Tetraparma Tetraparma gracilis
29937449 29937449 PRJNA949785_P_NODE_15151_length_254_cov_2.546961_g14954_i0 PRJNA949785 15151 254 2.546961 6.46928094 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 55.1 1.9e-6   NR QOY41774.1 5807 g14954 i0 38.6 4.55905511811024 83 49 98 1 6 254 315 395 QOY41774.1 Sec1-like protein [Cryptosporidium parvum] diamond 1158 55.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
30853587 30853587 PRJNA949785_P_NODE_6774_length_417_cov_1.119186_g6577_i0 PRJNA949785 6774 417 1.119186 4.66700562 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 88.2 3.2e-17   NR XP_024581140.1 4781 g6577 i0 42 3.16546762589928 100 58 71.9 0 101 400 251 350 XP_024581140.1 nuc156 family protein [Plasmopara halstedii] diamond 1320 88.6 0.99548532731377 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
31264444 31264444 PRJNA949785_P_NODE_1675_length_919_cov_2.875887_g1531_i0 PRJNA949785 1675 919 2.875887 26.42940153 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 248 8.64e-76   NR XP_028536015.1 85471 g1531 i0 44.1 7.41675734494015 270 151 88.1 0 825 16 144 413 XP_028536015.1 glycylpeptide N-tetradecanoyltransferase, putative [Plasmodium relictum] diamond 6816 248 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
31289300 31289300 PRJNA949785_P_NODE_15655_length_251_cov_0.865169_g15458_i0 PRJNA949785 15655 251 0.865169 2.17157419 Tetrahymena malaccensis 5901 SAR_Eukaryotes SAR_Eukaryotes 81.3 4.89e-16   NR KAL4439332.1 5901 g15458 i0 73.9 2.21115537848606 46 12 55 0 251 114 271 316 KAL4439332.1 hypothetical protein ABPG74_016995 [Tetrahymena malaccensis] diamond 555 81.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
32523517 32523517 PRJNA949785_P_NODE_19219_length_238_cov_2.490909_g19022_i0 PRJNA949785 19219 238 2.490909 5.92836342 Aureococcus anophagefferens 44056 SAR_Eukaryotes SAR_Eukaryotes 95.9 1.06e-23   NR XP_009039112.1 44056 g19022 i0 54.4 5.97478991596639 79 36 99.6 0 237 1 10 88 XP_009039112.1 hypothetical protein AURANDRAFT_29821, partial [Aureococcus anophagefferens] diamond 1422 95.9 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Aureococcus Aureococcus anophagefferens
32743993 32743993 PRJNA949785_P_NODE_16680_length_248_cov_0.880000_g16483_i0 PRJNA949785 16680 248 0.88 2.1824 Pelagophyceae sp. CCMP2 1982007 SAR_Eukaryotes SAR_Eukaryotes 81.6 7.32e-16   NR KAJ1444468.1 483370 g16483 i0 75.5 0.592741935483871 49 12 59.3 0 152 6 293 341 KAJ1444468.1 kinase-like domain-containing protein [Pelagophyceae sp. CCMP2097] diamond 147 81.6 1 Eukaryota Sar     Pelagophyceae       Pelagophyceae sp. CCMP2097

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;