contig_metadata
15 rows where bioproject = "PRJNA949785" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3483840 | 3483840 | PRJNA949785_P_NODE_4843_length_514_cov_1.047619_g4646_i0 | PRJNA949785 | 4843 | 514 | 1.047619 | 5.38476166 | uncultured Chroococcidiopsis sp. | 259957 | Bacteria | Bacteria | 743 | 0 | NTclustered | gi|225696260|gb|FJ805927.1| | 259957 | g4646 | i0 | 92.664 | 143.035019455253 | 518 | 34 | 100 | 3 | 1 | 514 | 3046 | 3563 | Uncultured Chroococcidiopsis sp. clone AS3_3 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 73520 | 743 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Chroococcidiopsidaceae | Chroococcidiopsis | uncultured Chroococcidiopsis sp. | |
| 4761594 | 4761594 | PRJNA949785_P_NODE_16524_length_248_cov_0.880000_g16327_i0 | PRJNA949785 | 16524 | 248 | 0.88 | 2.1824 | Nostoc sp. NIES-2111 | 1973475 | Bacteria | Bacteria | 76.8 | 1.33e-9 | NTclustered | gi|1210116560|dbj|AP018184.1| | 1973475 | g16327 | i0 | 87.879 | 0.540322580645161 | 66 | 7 | 27 | 1 | 56 | 121 | 103055 | 102991 | Nostoc sp. NIES-2111 DNA, nearly complete genome | blastn | 134 | 76.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sp. NIES-2111 | |
| 6036312 | 6036312 | PRJNA949785_P_NODE_16925_length_247_cov_0.885057_g16728_i0 | PRJNA949785 | 16925 | 247 | 0.885057 | 2.18609079 | Plectolyngbya terrestris | 3016457 | Bacteria | Bacteria | 388 | 1.5e-103 | NTclustered | gi|2106138546|gb|OK382086.1| | 2880694 | g16728 | i0 | 95.122 | 192.392712550607 | 246 | 12 | 99 | 0 | 1 | 246 | 2046 | 2291 | Plectolyngbya terrestris FBCC-A1479 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 47521 | 388 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Leptolyngbyales | Leptolyngbyaceae | Plectolyngbya | Plectolyngbya terrestris | |
| 17839462 | 17839462 | PRJNA949785_P_NODE_5314_length_487_cov_1.451691_g5117_i0 | PRJNA949785 | 5314 | 487 | 1.451691 | 7.06973517 | Phormidium | 1198 | Bacteria | Bacteria | 817 | 0 | NTclustered | gi|1566846234|dbj|LC455612.1| | 2510782 | g5117 | i0 | 96.92 | 110.439425051335 | 487 | 15 | 100 | 0 | 1 | 487 | 1173 | 687 | Phormidium sp. NIES-2121 gene for 23S ribosomal RNA, partial sequence | blastn | 53784 | 817 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Oscillatoriaceae | Phormidium | Phormidium sp. NIES-2121 | |
| 21664280 | 21664280 | PRJNA949785_P_NODE_18337_length_243_cov_0.905882_g18140_i0 | PRJNA949785 | 18337 | 243 | 0.905882 | 2.20129326 | uncultured Coleofasciculus sp. | 1267456 | Bacteria | Bacteria | 117 | 1.25e-30 | NR | CAA9257822.1 | 1267456 | g18140 | i0 | 100 | 0.740740740740741 | 60 | 0 | 74.1 | 0 | 180 | 1 | 1 | 60 | CAA9257822.1 ATP-dependent Clp protease proteolytic subunit [uncultured Coleofasciculus sp.] | diamond | 180 | 117 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Coleofasciculales | Coleofasciculaceae | Coleofasciculus | uncultured Coleofasciculus sp. | |
| 27625975 | 27625975 | PRJNA949785_P_NODE_16004_length_250_cov_0.870056_g15807_i0 | PRJNA949785 | 16004 | 250 | 0.870056 | 2.17514 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 52.8 | 1.13e-5 | NR | WP_190417489.1 | 3028117 | g15807 | i0 | 64.9 | 1.332 | 37 | 13 | 44.4 | 0 | 1 | 111 | 303 | 339 | WP_190417489.1 MULTISPECIES: glycosyltransferase family 2 protein [Cyanophyceae] | diamond | 333 | 52.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | |||||
| 28004937 | 28004937 | PRJNA949785_P_NODE_17145_length_246_cov_0.890173_g16948_i0 | PRJNA949785 | 17145 | 246 | 0.890173 | 2.18982558 | Coleofasciculaceae cyanobacterium | 3081323 | Bacteria | Bacteria | 100 | 2.57e-22 | NR | MEO8890062.1 | 3081323 | g16948 | i0 | 86.8 | 1.9390243902439 | 53 | 7 | 64.6 | 0 | 246 | 88 | 694 | 746 | MEO8890062.1 glycoside hydrolase [Coleofasciculaceae cyanobacterium] | diamond | 477 | 100 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Coleofasciculales | Coleofasciculaceae | Coleofasciculaceae cyanobacterium | ||
| 28232033 | 28232033 | PRJNA949785_P_NODE_16786_length_247_cov_0.885057_g16589_i0 | PRJNA949785 | 16786 | 247 | 0.885057 | 2.18609079 | Bacteria | 2 | Bacteria | Bacteria | 75.5 | 1.15e-13 | NR | HEY9821992.1 | 2762020 | g16589 | i0 | 82.9 | 1.48178137651822 | 41 | 7 | 49.8 | 0 | 1 | 123 | 517 | 557 | HEY9821992.1 transglutaminase domain-containing protein [Candidatus Sericytochromatia bacterium] | diamond | 366 | 75.9 | 0.994729907773386 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Sericytochromatia | Candidatus Sericytochromatia bacterium | |||||
| 29267443 | 29267443 | PRJNA949785_P_NODE_17169_length_246_cov_0.890173_g16972_i0 | PRJNA949785 | 17169 | 246 | 0.890173 | 2.18982558 | Brasilonema octagenarum | 417105 | Bacteria | Bacteria | 85.5 | 6.23e-20 | NR | NMF67470.1 | 417115 | g16972 | i0 | 76.4 | 0.670731707317073 | 55 | 13 | 67.1 | 0 | 212 | 48 | 10 | 64 | NMF67470.1 molybdenum-pterin-binding domain-containing protein [Brasilonema octagenarum UFV-OR1] | diamond | 165 | 85.5 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Scytonemataceae | Brasilonema | Brasilonema octagenarum | |
| 31005031 | 31005031 | PRJNA949785_P_NODE_17314_length_246_cov_0.890173_g17117_i0 | PRJNA949785 | 17314 | 246 | 0.890173 | 2.18982558 | Synechocystis sp. PCC 75 | 1143 | Bacteria | Bacteria | 150 | 7.859999999999998e-42 | NR | WP_009633475.1 | 927677 | g17117 | i0 | 91.4 | 2.96341463414634 | 81 | 7 | 98.8 | 0 | 3 | 245 | 148 | 228 | WP_009633475.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC [Synechocystis sp. PCC 7509] | diamond | 729 | 150 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Merismopediaceae | Synechocystis | Synechocystis sp. PCC 7509 | |
| 31447604 | 31447604 | PRJNA949785_P_NODE_16596_length_248_cov_0.880000_g16399_i0 | PRJNA949785 | 16596 | 248 | 0.88 | 2.1824 | Microcoleus sp. FACHB-1 | 2692820 | Bacteria | Bacteria | 121 | 5.75e-34 | NR | MBD2130230.1 | 2692820 | g16399 | i0 | 86.6 | 2.43145161290323 | 67 | 9 | 81 | 0 | 201 | 1 | 15 | 81 | MBD2130230.1 hypothetical protein [Microcoleus sp. FACHB-1] | diamond | 603 | 121 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Microcoleaceae | Microcoleus | Microcoleus sp. FACHB-1 | |
| 31833570 | 31833570 | PRJNA949785_P_NODE_18417_length_243_cov_0.858824_g18220_i0 | PRJNA949785 | 18417 | 243 | 0.858824 | 2.08694232 | Cyanophyceae | 3028117 | Bacteria | Bacteria | 55.8 | 1.4e-7 | NR | WP_414589245.1 | 1680591 | g18220 | i0 | 43.2 | 1.8641975308642 | 81 | 39 | 91.4 | 2 | 6 | 227 | 52 | 132 | WP_414589245.1 hypothetical protein [Scytonema sp. PCC 10023] | diamond | 453 | 55.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Scytonemataceae | Scytonema | Scytonema sp. PCC 10023 | |
| 32206876 | 32206876 | PRJNA949785_P_NODE_19098_length_241_cov_0.916667_g18901_i0 | PRJNA949785 | 19098 | 241 | 0.916667 | 2.20916747 | Oscillatoriales cyanobacterium | 1151 | Bacteria | Bacteria | 55.5 | 1.55e-7 | NR | TAE66774.1 | 1151 | g18901 | i0 | 65.9 | 2.06639004149378 | 41 | 13 | 49.8 | 1 | 123 | 4 | 28 | 68 | TAE66774.1 MAG: hypothetical protein EAZ86_19245 [Oscillatoriales cyanobacterium] | diamond | 498 | 55.5 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oscillatoriales | Oscillatoriales cyanobacterium | |||
| 32206880 | 32206880 | PRJNA949785_P_NODE_4838_length_514_cov_1.755102_g4641_i0 | PRJNA949785 | 4838 | 514 | 1.755102 | 9.02122428 | Prochlorococcus marinus | 1219 | Bacteria | Bacteria | 50.1 | 6.55e-4 | NR | WP_257008984.1 | 1219 | g4641 | i0 | 32.3 | 3.09922178988327 | 93 | 63 | 54.3 | 0 | 68 | 346 | 31 | 123 | WP_257008984.1 photosystem II biogenesis protein Psp29 [Prochlorococcus marinus] | diamond | 1593 | 50.1 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Prochlorococcaceae | Prochlorococcus | Prochlorococcus marinus | |
| 32680619 | 32680619 | PRJNA949785_P_NODE_18620_length_242_cov_0.911243_g18423_i0 | PRJNA949785 | 18620 | 242 | 0.911243 | 2.20520806 | Candidatus Sericytochromatia bacterium | 2762020 | Bacteria | Bacteria | 140 | 8.529999999999999e-37 | NR | HEY9892514.1 | 2762020 | g18423 | i0 | 96.2 | 0.979338842975207 | 79 | 3 | 97.9 | 0 | 5 | 241 | 90 | 168 | HEY9892514.1 potassium-transporting ATPase subunit KdpB [Candidatus Sericytochromatia bacterium] | diamond | 237 | 140 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Sericytochromatia | Candidatus Sericytochromatia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;