RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA949785" and tax_clade = "Amoebozoa"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Amoebozoa · 11 ✖

bioproject 1

  • PRJNA949785 · 11 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4761635 4761635 PRJNA949785_P_NODE_3084_length_671_cov_6.461538_g2903_i0 PRJNA949785 3084 671 6.461538 43.35691998 Heterostelium album PN5 2086695 Evosea other_Eukaryota 310 2.3999999999999998e-104   NR XP_020430508.1 670386 g2903 i0 74.6 6.03576751117735 193 49 86.3 0 634 56 1 193 XP_020430508.1 Rho GTPase [Heterostelium album PN500] diamond 4050 310 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
17839467 17839467 PRJNA949785_P_NODE_6314_length_438_cov_2.016438_g6117_i0 PRJNA949785 6314 438 2.016438 8.83199844 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 130 1.48e-33   NR XP_646604.1 352472 g6117 i0 44.4 1.94520547945205 142 79 97.3 0 435 10 17 158 XP_646604.1 hypothetical protein DDB_G0270184 [Dictyostelium discoideum AX4] diamond 852 130 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
26899059 26899059 PRJNA949785_P_NODE_17641_length_245_cov_0.895349_g17444_i0 PRJNA949785 17641 245 0.895349 2.19360505 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 47.4 6.68e-4   NR KAH3744612.1 1580589 g17444 i0 57.9 0.46530612244898 38 16 46.5 0 119 232 4 41 KAH3744612.1 hypothetical protein Pelo_13992 [Pelomyxa schiedti] diamond 114 47.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
27341767 27341767 PRJNA949785_P_NODE_13823_length_271_cov_0.974747_g13626_i0 PRJNA949785 13823 271 0.974747 2.64156437 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 45.1 0.00515   NR XP_004253729.1 370355 g13626 i0 54.3 0.387453874538745 35 16 38.7 0 166 270 4 38 XP_004253729.1 guanylate kinase, putative [Entamoeba invadens IP1] diamond 105 45.1 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
28099357 28099357 PRJNA949785_P_NODE_8285_length_368_cov_1.305085_g8088_i0 PRJNA949785 8285 368 1.305085 4.8027128 Cavenderia fasciculata 261658 Evosea other_Eukaryota 65.9 8.09e-10   NR XP_004360639.1 261658 g8088 i0 54.7 0.432065217391304 53 24 43.2 0 281 123 239 291 XP_004360639.1 general transcription factor IIH [Cavenderia fasciculata] diamond 159 65.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28478340 28478340 PRJNA949785_P_NODE_11686_length_299_cov_1.362832_g11489_i0 PRJNA949785 11686 299 1.362832 4.07486768 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 80.5 9.94e-16   NR XP_004256870.1 370355 g11489 i0 59.6 1.53511705685619 47 19 47.2 0 1 141 220 266 XP_004256870.1 ariadne RING finger, putative [Entamoeba invadens IP1] diamond 459 80.5 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
28484967 28484967 PRJNA949785_P_NODE_7006_length_409_cov_0.916667_g6809_i0 PRJNA949785 7006 409 0.916667 3.74916803 Eumycetozoa 142796 Evosea other_Eukaryota 132 1.29e-34   NR XP_003284501.1 5786 g6809 i0 47.8 2.9559902200489 134 69 98.3 1 5 406 136 268 XP_003284501.1 uncharacterized protein DICPUDRAFT_96732 [Dictyostelium purpureum] diamond 1209 133 0.992481203007519 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28699520 28699520 PRJNA949785_P_NODE_8727_length_356_cov_1.392226_g8530_i0 PRJNA949785 8727 356 1.392226 4.95632456 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 80.5 7.43e-15   NR XP_012758213.1 1410327 g8530 i0 47.4 1.43258426966292 76 40 64 0 356 129 400 475 XP_012758213.1 hypothetical protein SAMD00019534_007920, partial [Acytostelium subglobosum LB1] diamond 510 80.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
29456775 29456775 PRJNA949785_P_NODE_16530_length_248_cov_0.880000_g16333_i0 PRJNA949785 16530 248 0.88 2.1824 Dictyostelium purpureum 5786 Evosea other_Eukaryota 66.6 6.94e-11   NR XP_003292601.1 5786 g16333 i0 37.5 2.92741935483871 80 49 96.8 1 7 246 38 116 XP_003292601.1 uncharacterized protein DICPUDRAFT_40821 [Dictyostelium purpureum] diamond 726 66.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
31384457 31384457 PRJNA949785_P_NODE_1136_length_1103_cov_4.973786_g1022_i0 PRJNA949785 1136 1103 4.973786 54.86085958 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 51.2 0.0074   NR XP_641817.1 352472 g1022 i0 22.2 0.601087941976428 221 150 59.3 4 753 100 960 1161 XP_641817.1 hypothetical protein DDB_G0279365 [Dictyostelium discoideum AX4] diamond 663 51.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31454340 31454340 PRJNA949785_P_NODE_6436_length_432_cov_1.462396_g6239_i0 PRJNA949785 6436 432 1.462396 6.31755072 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 83.2 2.16e-15   NR KYR02016.1 361077 g6239 i0 29.7 2.86805555555556 138 97 95.8 0 18 431 108 245 KYR02016.1 oligomeric Golgi complex component [Tieghemostelium lacteum] diamond 1239 84 0.990476190476191 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;