RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA946307" and tax_phylum = "Promethearchaeota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA946307 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11130854 11130854 PRJNA946307_P_NODE_38769_length_214_cov_3.042424_g37895_i0 PRJNA946307 38769 214 3.042424 6.51078736 Promethearchaeota archaeon 2053489 Archaea Archaea 67.6 6.73e-7   NTclustered gi|2107931243|gb|CP070805.1| 2053489 g37895 i0 87.719 0.644859813084112 57 7 27 0 119 175 162423 162479 MAG: Promethearchaeota archaeon isolate bin132 chromosome blastn 138 67.6 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
31953575 31953575 PRJNA946307_P_NODE_90337_length_188_cov_3.374101_g89463_i0 PRJNA946307 90337 188 3.374101 6.34330988 Promethearchaeia archaeon 3067280 Archaea Archaea 43.1 0.0134   NR MFO7796291.1 3067280 g89463 i0 42.9 0.670212765957447 42 24 67 0 59 184 554 595 MFO7796291.1 LAGLIDADG family homing endonuclease [Promethearchaeia archaeon] diamond 126 43.1 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;