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contig_metadata

14 rows where bioproject = "PRJNA946307" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA946307 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3812237 3812237 PRJNA946307_P_NODE_157583_length_163_cov_0.912281_g156709_i0 PRJNA946307 157583 163 0.912281 1.48701803 Macrostomum 39217 Platyhelminthes Platyhelminthes 270 3.4499999999999993e-68   NTclustered gi|261873755|gb|FJ715320.1| 52054 g156709 i0 99.333 92.2269938650307 150 0 91 1 1 149 1028 879 Macrostomum tuba voucher MTP LS 261 28S large subunit ribosomal RNA gene, partial sequence blastn 15033 270 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum tuba
6029332 6029332 PRJNA946307_P_NODE_136025_length_168_cov_3.067227_g135151_i0 PRJNA946307 136025 168 3.067227 5.15294136 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 241 2.81e-59   NTclustered gi|926460157|gb|KR132223.1| 282301 g135151 i0 98.529 0.80952380952381 136 2 81 0 6 141 526 391 Macrostomum lignano clone c100550_g1_i1 mRNA sequence blastn 136 241 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
6364494 6364494 PRJNA946307_P_NODE_28705_length_242_cov_1.015544_g27831_i0 PRJNA946307 28705 242 1.015544 2.45761648 Platyhelminthes 6157 Platyhelminthes Platyhelminthes 76.8 1.29e-9   NTclustered gi|115605663|gb|DQ925331.1| 406067 g27831 i0 82.418 33.9669421487603 91 13 37 3 1 90 356 268 Paraechinophallus japonicus 28S ribosomal RNA gene, partial sequence blastn 8220 76.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Pseudophyllidea Parabothriocephalidae Paraechinophallus Paraechinophallus japonicus
7306045 7306045 PRJNA946307_P_NODE_81326_length_193_cov_2.395833_g80452_i0 PRJNA946307 81326 193 2.395833 4.62395769 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 331 1.91e-86   NTclustered gi|28273263|gb|AY157151.1| 52061 g80452 i0 100 75.1658031088083 179 0 93 0 1 179 2521 2343 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 14507 331 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
8580517 8580517 PRJNA946307_P_NODE_62247_length_203_cov_1.487013_g61373_i0 PRJNA946307 62247 203 1.487013 3.01863639 Paracatenula sp. CEL-2014 1468208 Platyhelminthes Platyhelminthes 99 2.24e-16   NTclustered gi|588313877|gb|KC869835.1| 1468208 g61373 i0 87.5 38.4729064039409 88 8 42 3 1 86 1708 1622 Paracatenula sp. CEL-2014 28S ribosomal RNA gene, partial sequence blastn 7810 99 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Catenulidae Paracatenula Paracatenula sp. CEL-2014
11129301 11129301 PRJNA946307_P_NODE_10809_length_406_cov_8.028011_g9952_i0 PRJNA946307 10809 406 8.028011 32.59372466 Progamotaenia spearei 1117265 Platyhelminthes Platyhelminthes 102 3.81e-17   NTclustered gi|358748173|gb|JN683699.1| 1117265 g9952 i0 89.157 24.2167487684729 83 8 20 1 238 319 1249 1331 Progamotaenia spearei isolate V92 28S ribosomal RNA gene, partial sequence blastn 9832 102 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Anoplocephalidae Progamotaenia Progamotaenia spearei
12405449 12405449 PRJNA946307_P_NODE_145190_length_166_cov_0.888889_g144316_i0 PRJNA946307 145190 166 0.888889 1.47555574 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 254 3.55e-63   NTclustered gi|10945139|emb|AJ270178.1| 52061 g144316 i0 97.315 94.1566265060241 149 4 90 0 15 163 1493 1641 Stenostomum leucops partial 28S rRNA gene blastn 15630 254 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
12740399 12740399 PRJNA946307_P_NODE_98830_length_185_cov_1.147059_g97956_i0 PRJNA946307 98830 185 1.147059 2.12205915 Metazoa 33208 Platyhelminthes Platyhelminthes 89.8 1.2e-13   NTclustered gi|1243283765|gb|KY320127.1| 99407 g97956 i0 78.723 48.3081081081081 141 25 76 3 2 142 1225 1090 Monostichoplana filum isolate MFHE1 28S ribosomal RNA gene, partial sequence blastn 8937 89.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Otoplanidae Monostichoplana Monostichoplana filum
19111866 19111866 PRJNA946307_P_NODE_33975_length_225_cov_3.056818_g33101_i0 PRJNA946307 33975 225 3.056818 6.8778405 Platyhelminthes 6157 Platyhelminthes Platyhelminthes 139 1.49e-28   NTclustered gi|472441132|gb|KC529546.1| 297427 g33101 i0 90.476 46.6311111111111 105 10 47 0 1 105 1112 1008 Ptychopera westbladi isolate UH143.12 28S ribosomal RNA gene, partial sequence blastn 10492 139 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Trigonostomidae Ptychopera Ptychopera westbladi
21329383 21329383 PRJNA946307_P_NODE_42257_length_211_cov_5.444444_g41383_i0 PRJNA946307 42257 211 5.444444 11.48777684 Macrostomum sp. CEL-2014 1468207 Platyhelminthes Platyhelminthes 241 3.69e-59   NTclustered gi|588313885|gb|KC869843.1| 1468207 g41383 i0 87.065 117.161137440758 201 21 93 3 15 210 2175 2375 Macrostomum sp. CEL-2014 28S ribosomal RNA gene, partial sequence blastn 24721 241 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum sp. CEL-2014
22604215 22604215 PRJNA946307_P_NODE_35998_length_220_cov_2.649123_g35124_i0 PRJNA946307 35998 220 2.649123 5.8280706 Bdelloura candida 46766 Platyhelminthes Platyhelminthes 95.3 3.19e-15   NTclustered gi|28273266|gb|AY157154.1| 46766 g35124 i0 89.333 2.87727272727273 75 8 34 0 11 85 1626 1700 Bdelloura candida 28S large subunit ribosomal RNA gene, partial sequence blastn 633 95.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Bdellouridae Bdelloura Bdelloura candida
23879533 23879533 PRJNA946307_P_NODE_25279_length_256_cov_1.898551_g24405_i0 PRJNA946307 25279 256 1.898551 4.86029056 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 431 2.56e-116   NTclustered gi|28273263|gb|AY157151.1| 52061 g24405 i0 98.76 43.1171875 242 3 95 0 1 242 2070 1829 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 11038 431 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
25486572 25486572 PRJNA946307_P_NODE_132440_length_170_cov_1.066116_g131566_i0 PRJNA946307 132440 170 1.066116 1.8123972 Stenostomum 39238 Platyhelminthes Platyhelminthes 289 9.949999999999999e-74   NTclustered gi|2177180|gb|U95947.1|SSU95947 60215 g131566 i0 100 89.2058823529412 156 0 92 0 14 169 223 378 Stenostomum sp. 'Aguinaldo, 1997' 18S ribosomal RNA gene, complete sequence blastn 15165 289 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sp. 'Aguinaldo, 1997'
30822004 30822004 PRJNA946307_P_NODE_55074_length_210_cov_2.900621_g54200_i0 PRJNA946307 55074 210 2.900621 6.0913041 Platyhelminthes 6157 Platyhelminthes Platyhelminthes 44.3 0.00712   NR VZI12983.1 99802 g54200 i0 65.5 5.58571428571429 29 10 41.4 0 118 204 111 139 VZI12983.1 unnamed protein product [Spirometra erinaceieuropaei] diamond 1173 44.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;