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contig_metadata

27 rows where bioproject = "PRJNA946307", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 27 ✖

tax_phylum 1

  • Pisuviricota · 27 ✖

tax_kingdom 1

bioproject 1

  • PRJNA946307 · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
926799 926799 PRJNA946307_P_NODE_1_length_8287_cov_76.507162_g0_i0 PRJNA946307 1 8287 76.507162 6340.14851494 Dicistroviridae sp. 1955144 Viruses Viruses 2486 0   NR XCO49139.1 1955144 g0 i0 79.1 0.558947749487149 1544 239 53.5 7 1759 6195 1 1525 XCO49139.1 MAG: putative ORF1 protein, partial [Dicistroviridae sp.] diamond 4632 2486 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
4756126 4756126 PRJNA946307_P_NODE_6984_length_534_cov_3.657732_g6198_i0 PRJNA946307 6984 534 3.657732 19.53228888 Poaceae Liege partitivirus 6 2972889 Viruses Viruses 944 0   NTclustered gi|2288738604|gb|OL330745.1| 2972889 g6198 i0 99.423 1.02808988764045 520 3 97 0 15 534 817 1336 Poaceae Liege partitivirus 6 putative RNA-dependent RNA polymerase (ORF1) gene, complete cds blastn 549 944 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Poaceae Liege partitivirus 6
6028711 6028711 PRJNA946307_P_NODE_101305_length_183_cov_4.029851_g100431_i0 PRJNA946307 101305 183 4.029851 7.37462733 Pinus sylvestris partitivirus NL-2005 328694 Viruses Viruses 291 3.03e-74   NTclustered gi|66476364|gb|AY973825.1| 328694 g100431 i0 99.375 0.87431693989071 160 1 87 0 10 169 1078 919 Pinus sylvestris partitivirus NL-2005 putative RNA-dependent RNA polymerase gene, partial cds blastn 160 291 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Pinus sylvestris partitivirus NL-2005
8580996 8580996 PRJNA946307_P_NODE_8867_length_460_cov_2.328467_g8036_i0 PRJNA946307 8867 460 2.328467 10.7109482 Poaceae Liege partitivirus 6 2972889 Viruses Viruses 802 0   NTclustered gi|2288738604|gb|OL330745.1| 2972889 g8036 i0 99.103 0.969565217391304 446 4 97 0 1 446 479 34 Poaceae Liege partitivirus 6 putative RNA-dependent RNA polymerase (ORF1) gene, complete cds blastn 446 802 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Poaceae Liege partitivirus 6
9855211 9855211 PRJNA946307_P_NODE_38768_length_214_cov_3.048485_g37894_i0 PRJNA946307 38768 214 3.048485 6.5237579 Nepovirus betae 3050242 Viruses Viruses 327 2.8e-85   NTclustered gi|2073348417|gb|MZ202338.1| 191547 g37894 i0 96.465 27.1448598130841 198 7 93 0 1 198 1080 883 Beet ringspot virus isolate DSMZ PV-0521 segment RNA 2, complete sequence blastn 5809 327 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Nepovirus betae
11131729 11131729 PRJNA946307_P_NODE_89929_length_189_cov_1.100000_g89055_i0 PRJNA946307 89929 189 1.1 2.079 Betacoronavirus pandemicum 3418604 Viruses Viruses 324 3.11e-84   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g89055 i0 100 92.5925925925926 175 0 93 0 15 189 12139 12313 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 17500 324 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12406925 12406925 PRJNA946307_P_NODE_71110_length_199_cov_2.993333_g70236_i0 PRJNA946307 71110 199 2.993333 5.95673267 Erysiphe necator associated fusarivirus 3 2743151 Viruses Viruses 156 1.28e-33   NTclustered gi|1851774059|gb|MN627479.1| 2743151 g70236 i0 95.833 0.919597989949749 96 4 91 0 5 100 887 792 Erysiphe necator associated fusarivirus 3 isolate PMS5_DN29549, complete genome blastn 183 156 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Fusariviridae   Erysiphe necator associated fusarivirus 3
13681314 13681314 PRJNA946307_P_NODE_62671_length_202_cov_3.183007_g61797_i0 PRJNA946307 62671 202 3.183007 6.42967414 Porcine picobirnavirus 442302 Viruses Viruses 111 2.86e-20   NTclustered gi|2095880689|gb|MW978564.1| 442302 g61797 i0 90.476 1.92574257425743 84 8 82 0 19 102 2122 2205 MAG: Porcine picobirnavirus isolate 15217_NODE_144_len_2531_cov_92.661147 hypothetical protein and capsid protein-like gene, partial sequence blastn 389 111 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Porcine picobirnavirus
14955447 14955447 PRJNA946307_P_NODE_56952_length_210_cov_2.770186_g56078_i0 PRJNA946307 56952 210 2.770186 5.8173906 Periplaneta americana dicistro-like virus 3032225 Viruses Viruses 191 3.74e-44   NTclustered gi|2754804027|tpg|BK063169.1| 3032225 g56078 i0 84.021 0.923809523809524 194 26 92 1 17 210 523 711 TPA_asm: Periplaneta americana dicistro-like virus hypothetical protein gene, partial cds blastn 194 191 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Periplaneta americana dicistro-like virus
18778653 18778653 PRJNA946307_P_NODE_21715_length_274_cov_10.493333_g20842_i0 PRJNA946307 21715 274 10.493333 28.75173242 Hanko picorna-like virus 2980576 Viruses Viruses 442 1.2799999999999994e-119   NTclustered gi|2320141567|gb|ON955109.1| 2980576 g20842 i0 97.308 2.84671532846715 260 7 95 0 1 260 946 687 MAG: Hanko picorna-like virus isolate FIN/U-2018/92-2 polyprotein gene, partial cds blastn 780 442 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Hanko picorna-like virus
20053801 20053801 PRJNA946307_P_NODE_36776_length_218_cov_2.946746_g35902_i0 PRJNA946307 36776 218 2.946746 6.42390628 Periplaneta americana dicistro-like virus 3032225 Viruses Viruses 224 3.859999999999999e-54   NTclustered gi|2754804027|tpg|BK063169.1| 3032225 g35902 i0 87.895 0.871559633027523 190 23 87 0 13 202 881 692 TPA_asm: Periplaneta americana dicistro-like virus hypothetical protein gene, partial cds blastn 190 224 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Periplaneta americana dicistro-like virus
20054414 20054414 PRJNA946307_P_NODE_7016_length_532_cov_19.861284_g6230_i0 PRJNA946307 7016 532 19.861284 105.66203088 Hanko picorna-like virus 2980576 Viruses Viruses 889 0   NTclustered gi|2320141565|gb|ON955108.1| 2980576 g6230 i0 97.679 2.91541353383459 517 12 97 0 2 518 1418 902 MAG: Hanko picorna-like virus isolate FIN/U-2018/92-1 polyprotein gene, partial cds blastn 1551 889 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Hanko picorna-like virus
21327937 21327937 PRJNA946307_P_NODE_117577_length_176_cov_2.181102_g116703_i0 PRJNA946307 117577 176 2.181102 3.83873952 Pinus sylvestris partitivirus NL-2005 328694 Viruses Viruses 267 4.8699999999999996e-67   NTclustered gi|66476364|gb|AY973825.1| 328694 g116703 i0 96.319 0.926136363636364 163 5 92 1 1 162 683 521 Pinus sylvestris partitivirus NL-2005 putative RNA-dependent RNA polymerase gene, partial cds blastn 163 267 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Pinus sylvestris partitivirus NL-2005
21327985 21327985 PRJNA946307_P_NODE_120217_length_175_cov_1.547619_g119343_i0 PRJNA946307 120217 175 1.547619 2.70833325 Nepovirus betae 3050242 Viruses Viruses 248 1.7499999999999998e-61   NTclustered gi|20260800|ref|NC_003694.1| 191547 g119343 i0 93.902 10.6342857142857 164 10 94 0 12 175 1331 1494 Beet ringspot virus RNA 2, complete sequence blastn 1861 248 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Nepovirus betae
21329285 21329285 PRJNA946307_P_NODE_37997_length_215_cov_4.433735_g37123_i0 PRJNA946307 37997 215 4.433735 9.53253025 Betacoronavirus pandemicum 3418604 Viruses Viruses 189 1.3799999999999999e-43   NTclustered gi|2523467093|emb|OX976994.1| 2697049 g37123 i0 100 93.0325581395349 102 0 94 0 3 104 9859 9758 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 20002 189 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23878544 23878544 PRJNA946307_P_NODE_124599_length_173_cov_1.701613_g123725_i0 PRJNA946307 124599 173 1.701613 2.94379049 Nepovirus avii 3047741 Viruses Viruses 252 1.33e-62   NTclustered gi|2105858737|gb|MT935684.1| 12615 g123725 i0 95 20.606936416185 160 8 92 0 14 173 4608 4767 Cherry leaf roll virus isolate 19NR014 segment RNA1, complete sequence blastn 3565 252 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Nepovirus avii
23880666 23880666 PRJNA946307_P_NODE_91619_length_188_cov_1.395683_g90745_i0 PRJNA946307 91619 188 1.395683 2.62388404 Poaceae Liege partitivirus 6 2972889 Viruses Viruses 331 1.85e-86   NTclustered gi|2288738604|gb|OL330745.1| 2972889 g90745 i0 98.404 27.4734042553191 188 3 100 0 1 188 1557 1744 Poaceae Liege partitivirus 6 putative RNA-dependent RNA polymerase (ORF1) gene, complete cds blastn 5165 331 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Poaceae Liege partitivirus 6
26740170 26740170 PRJNA946307_P_NODE_81121_length_193_cov_3.034722_g80247_i0 PRJNA946307 81121 193 3.034722 5.85701346 Dicistroviridae sp. 1955144 Viruses Viruses 47.4 4.35e-4   NR XCO49265.1 1955144 g80247 i0 69 1.33678756476684 29 9 45.1 0 9 95 489 517 XCO49265.1 MAG: putative ORF1 protein, partial [Dicistroviridae sp.] diamond 258 47.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
27214825 27214825 PRJNA946307_P_NODE_117842_length_176_cov_1.598425_g116968_i0 PRJNA946307 117842 176 1.598425 2.813228 Scotland dicistro-like virus 2789512 Viruses Viruses 53.5 2.37e-6   NR QPN36963.1 2789512 g116968 i0 77.1 0.596590909090909 35 8 59.7 0 162 58 1886 1920 QPN36963.1 polyprotein 1 [Scotland dicistro-like virus] diamond 105 53.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Scotland dicistro-like virus
27569174 27569174 PRJNA946307_P_NODE_108624_length_180_cov_2.183206_g107750_i0 PRJNA946307 108624 180 2.183206 3.9297708 Orthopicobirnavirus 2948851 Viruses Viruses 53.5 2.42e-6   NR USE07769.1 1907787 g107750 i0 58.3 3.46666666666667 36 15 60 0 121 14 339 374 USE07769.1 MAG: putative RNA-dependent RNA polymerase, partial [Picobirnavirus sp.] diamond 624 53.5 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Picobirnavirus sp.
28193886 28193886 PRJNA946307_P_NODE_89746_length_189_cov_1.321429_g88872_i0 PRJNA946307 89746 189 1.321429 2.49750081 Panax cryptic virus 4 2809267 Viruses Viruses 56.6 2.25e-7   NR QRG29207.1 2809267 g88872 i0 74.2 0.492063492063492 31 8 49.2 0 15 107 225 255 QRG29207.1 putative CP [Panax cryptic virus 4] diamond 93 56.6 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Panax cryptic virus 4
29299175 29299175 PRJNA946307_P_NODE_28749_length_241_cov_5.958333_g27875_i0 PRJNA946307 28749 241 5.958333 14.35958253 Shenzhen dicistro-like virus 2789378 Viruses Viruses 66.6 1.45e-10   NR QPG92982.1 2789378 g27875 i0 45.6 1.96680497925311 79 38 92.1 2 223 2 792 870 QPG92982.1 polyprotein [Shenzhen dicistro-like virus] diamond 474 66.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
30657311 30657311 PRJNA946307_P_NODE_35773_length_220_cov_6.198830_g34899_i0 PRJNA946307 35773 220 6.19883 13.637426 Trichoderma citrinoviride partitivirus 1 2501046 Viruses Viruses 109 7.36e-26   NR AZT88592.1 2501046 g34899 i0 79.4 0.927272727272727 68 13 91.4 1 216 16 560 627 AZT88592.1 RNA-dependent RNA polymerase [Trichoderma citrinoviride partitivirus 1] diamond 204 109 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Trichoderma citrinoviride partitivirus 1
31068286 31068286 PRJNA946307_P_NODE_4295_length_705_cov_23.233232_g3654_i0 PRJNA946307 4295 705 23.233232 163.7942856 Dicistroviridae sp. 1955144 Viruses Viruses 73.9 4.38e-11   NR QJI52110.1 1955144 g3654 i0 36.1 0.659574468085106 155 83 61.7 5 653 219 689 837 QJI52110.1 MAG: hypothetical protein 2 [Dicistroviridae sp.] diamond 465 73.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
31795217 31795217 PRJNA946307_P_NODE_46197_length_210_cov_4.596273_g45323_i0 PRJNA946307 46197 210 4.596273 9.6521733 Beet ringspot virus 191547 Viruses Viruses 59.3 3.45e-8   NR NP_620113.1 191547 g45323 i0 84.4 3.2 32 5 45.7 0 111 206 465 496 NP_620113.1 polyprotein [Beet ringspot virus] diamond 672 59.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Nepovirus betae
32111835 32111835 PRJNA946307_P_NODE_172038_length_154_cov_2.704762_g171164_i0 PRJNA946307 172038 154 2.704762 4.16533348 Periplaneta americana dicistro-like virus 3032225 Viruses Viruses 87.4 1.92e-18   NR DBA56413.1 3032225 g171164 i0 95.6 0.876623376623377 45 2 87.7 0 15 149 656 700 DBA56413.1 TPA_asm: hypothetical protein, partial [Periplaneta americana dicistro-like virus] diamond 135 87.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Periplaneta americana dicistro-like virus
32555154 32555154 PRJNA946307_P_NODE_84999_length_191_cov_1.943662_g84125_i0 PRJNA946307 84999 191 1.943662 3.71239442 Paris mosaic necrosis virus 2058396 Viruses Viruses 93.6 2.32e-20   NR WYJ74782.1 2058396 g84125 i0 75.4 0.895287958115183 57 14 89.5 0 16 186 251 307 WYJ74782.1 putative RNA-dependent RNA polymerase [Paris mosaic necrosis virus] diamond 171 93.6 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus parisnecrosis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;