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contig_metadata

20 rows where bioproject = "PRJNA946307" and tax_phylum = "Nitrososphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA946307 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4756526 4756526 PRJNA946307_P_NODE_92924_length_187_cov_2.579710_g92050_i0 PRJNA946307 92924 187 2.57971 4.8240577 Candidatus Nitrosopolaris sp. 3069383 Archaea Archaea 94.7 6.28e-21   NR HYV57425.1 3069383 g92050 i0 72.1 3.67379679144385 61 17 97.9 0 184 2 73 133 HYV57425.1 acyltransferase [Candidatus Nitrosopolaris sp.] diamond 687 94.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosopolaris Candidatus Nitrosopolaris sp.
6030373 6030373 PRJNA946307_P_NODE_36645_length_218_cov_4.360947_g35771_i0 PRJNA946307 36645 218 4.360947 9.50686446 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 361 2.82e-95   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g35771 i0 99.005 73.7614678899083 201 2 92 0 4 204 1789563 1789363 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 16080 361 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
12407073 12407073 PRJNA946307_P_NODE_80030_length_194_cov_1.834483_g79156_i0 PRJNA946307 80030 194 1.834483 3.55889702 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 353 4.1e-93   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g79156 i0 99.485 15.8865979381443 194 1 100 0 1 194 1789632 1789825 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 3082 353 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
14955732 14955732 PRJNA946307_P_NODE_74332_length_198_cov_2.664430_g73458_i0 PRJNA946307 74332 198 2.66443 5.2755714 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 329 7.08e-86   NTclustered gi|937513727|gb|CP012850.1| 1353260 g73458 i0 98.913 8.86363636363636 184 2 93 0 15 198 849242 849425 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 1755 329 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
15288106 15288106 PRJNA946307_P_NODE_1572_length_1124_cov_5.409302_g1234_i0 PRJNA946307 1572 1124 5.409302 60.80055448 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 1827 0   NTclustered gi|937513727|gb|CP012850.1| 1353260 g1234 i0 96.724 87.2330960854093 1099 33 98 3 13 1110 849298 848202 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 98050 1834 0.99618320610687 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
25151705 25151705 PRJNA946307_P_NODE_102780_length_183_cov_1.447761_g101906_i0 PRJNA946307 102780 183 1.447761 2.64940263 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 254 3.98e-63   NTclustered gi|937513727|gb|CP012850.1| 1353260 g101906 i0 93.567 87.120218579235 171 10 93 1 1 170 848074 847904 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 15943 254 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
26835688 26835688 PRJNA946307_P_NODE_172521_length_153_cov_4.423077_g171647_i0 PRJNA946307 172521 153 4.423077 6.76730781 Nitrosarchaeum sp. 2026886 Archaea Archaea 65.5 1.02e-10   NR MBS3922737.1 2026886 g171647 i0 65.2 1.80392156862745 46 16 90.2 0 139 2 404 449 MBS3922737.1 beta-lactamase family protein [Nitrosarchaeum sp.] diamond 276 65.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
26993597 26993597 PRJNA946307_P_NODE_94882_length_186_cov_3.065693_g94008_i0 PRJNA946307 94882 186 3.065693 5.70218898 Nitrososphaera sp. 1971748 Archaea Archaea 43.5 0.00727   NR MCI0561479.1 1971748 g94008 i0 40 1.45161290322581 45 27 72.6 0 137 3 80 124 MCI0561479.1 toprim domain-containing protein [Nitrososphaera sp.] diamond 270 43.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
27404790 27404790 PRJNA946307_P_NODE_103443_length_182_cov_4.383459_g102569_i0 PRJNA946307 103443 182 4.383459 7.97789538 Nitrosopumilus sp. 2024843 Archaea Archaea 104 1.2099999999999999e-24   NR MBA3977413.1 2024843 g102569 i0 81.8 0.906593406593407 55 10 90.7 0 18 182 1 55 MBA3977413.1 threonine synthase [Nitrosopumilus sp.] diamond 165 104 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
28004877 28004877 PRJNA946307_P_NODE_71645_length_199_cov_2.780000_g70771_i0 PRJNA946307 71645 199 2.78 5.5322 Nitrososphaerales archaeon 2268197 Archaea Archaea 77.8 8.45e-15   NR MFI5405223.1 2268197 g70771 i0 51.4 1.05527638190955 70 25 92 1 15 197 231 300 MFI5405223.1 twitch domain-containing radical SAM protein [Nitrososphaerales archaeon] diamond 210 77.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
28193890 28193890 PRJNA946307_P_NODE_91266_length_188_cov_1.841727_g90392_i0 PRJNA946307 91266 188 1.841727 3.46244676 Marine Group I thaumarchaeote 2511932 Archaea Archaea 48.1 2.2e-4   NR NWK05358.1 2511932 g90392 i0 38.7 0.98936170212766 62 33 91 2 3 173 64 125 NWK05358.1 MBL fold metallo-hydrolase [Marine Group I thaumarchaeote] diamond 186 48.1 1 Archaea Marine Group I Thermoproteati Nitrososphaerota         Marine Group I thaumarchaeote
29456682 29456682 PRJNA946307_P_NODE_26210_length_252_cov_1.635468_g25336_i0 PRJNA946307 26210 252 1.635468 4.12137936 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 79.3 1.84e-15   NR HVD07366.1 2169593 g25336 i0 54.9 1.08333333333333 91 32 97.6 3 252 7 55 145 HVD07366.1 retropepsin-like aspartic protease [Nitrososphaeraceae archaeon] diamond 273 79.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30499396 30499396 PRJNA946307_P_NODE_17493_length_307_cov_5.011628_g16622_i0 PRJNA946307 17493 307 5.011628 15.38569796 Nitrososphaera sp. 1971748 Archaea Archaea 73.2 6.48e-13   NR NOJ26544.1 1971748 g16622 i0 63.6 1.07491856677524 55 19 53.7 1 142 306 4 57 NOJ26544.1 hypothetical protein [Nitrososphaera sp.] diamond 330 73.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
30594043 30594043 PRJNA946307_P_NODE_30453_length_236_cov_1.909091_g29579_i0 PRJNA946307 30453 236 1.909091 4.50545476 Nitrososphaerota archaeon 2026795 Archaea Archaea 49.7 5.18e-5   NR MDE1866457.1 2026795 g29579 i0 36.4 1.91949152542373 77 45 92.8 2 3 221 7 83 MDE1866457.1 J domain-containing protein [Nitrososphaerota archaeon] diamond 453 49.7 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31415844 31415844 PRJNA946307_P_NODE_127596_length_172_cov_1.455285_g126722_i0 PRJNA946307 127596 172 1.455285 2.5030902 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 50.8 1.64e-5   NR HEY5631421.1 2169593 g126722 i0 41.2 0.88953488372093 51 30 89 0 159 7 141 191 HEY5631421.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 153 50.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31921906 31921906 PRJNA946307_P_NODE_115517_length_177_cov_1.968750_g114643_i0 PRJNA946307 115517 177 1.96875 3.4846875 Nitrosopumilus sp. 2024843 Archaea Archaea 73.9 1.49e-13   NR MEK0324366.1 2024843 g114643 i0 65.4 0.88135593220339 52 18 88.1 0 173 18 455 506 MEK0324366.1 hypothetical protein [Nitrosopumilus sp.] diamond 156 73.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31953514 31953514 PRJNA946307_P_NODE_174697_length_150_cov_5.534653_g173823_i0 PRJNA946307 174697 150 5.534653 8.3019795 Nitrososphaera sp. 1971748 Archaea Archaea 85.5 4.11e-18   NR HEU0046132.1 1971748 g173823 i0 75.6 1.8 45 11 90 0 150 16 82 126 HEU0046132.1 hypothetical protein [Nitrososphaera sp.] diamond 270 85.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32023633 32023633 PRJNA946307_P_NODE_59238_length_208_cov_10.509434_g58364_i0 PRJNA946307 59238 208 10.509434 21.85962272 root 1 Root_unresolved Root_unresolved 47 6.4899999999999e-4   NR HEU0049262.1 1971748 g58364 i0 70 3.50480769230769 30 9 43.3 0 101 12 162 191 HEU0049262.1 DDE-type integrase/transposase/recombinase [Nitrososphaera sp.] diamond 729 47.4 0.991561181434599 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
32080062 32080062 PRJNA946307_P_NODE_120478_length_175_cov_1.539683_g119604_i0 PRJNA946307 120478 175 1.539683 2.69444525 Nitrososphaerota archaeon 2026795 Archaea Archaea 47.4 8.2e-5   NR MDD9809427.1 2026795 g119604 i0 75 1.86857142857143 28 7 48 0 175 92 56 83 MDD9809427.1 tetratricopeptide repeat protein [Nitrososphaerota archaeon] diamond 327 47.4 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32901083 32901083 PRJNA946307_P_NODE_49560_length_210_cov_3.484472_g48686_i0 PRJNA946307 49560 210 3.484472 7.3173912 Nitrososphaerales archaeon 2268197 Archaea Archaea 57 2.17e-7   NR MFI5407230.1 2268197 g48686 i0 92.9 0.8 28 2 40 0 111 194 254 281 MFI5407230.1 histidine kinase dimerization/phospho-acceptor domain-containing protein [Nitrososphaerales archaeon] diamond 168 57 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;