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contig_metadata

33 rows where bioproject = "PRJNA946307" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 33 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA946307 · 33 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3477098 3477098 PRJNA946307_P_NODE_150683_length_165_cov_0.879310_g149809_i0 PRJNA946307 150683 165 0.87931 1.4508615 Tobamovirus fructirugosum 3432872 Viruses Viruses 265 1.6299999999999998e-66   NTclustered gi|2837380226|gb|PP099906.1| 1761477 g149809 i0 99.315 88.4848484848485 146 1 88 0 6 151 1856 1711 Tomato brown rugose fruit virus isolate NPPO-NL 41761543, complete genome blastn 14600 265 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
4755313 4755313 PRJNA946307_P_NODE_24284_length_261_cov_1.971698_g23410_i0 PRJNA946307 24284 261 1.971698 5.14613178 Tobamovirus tabaci 3432891 Viruses Viruses 237 6.12e-58   NTclustered gi|2085707074|gb|MW521351.1| 12242 g23410 i0 98.507 87.7318007662835 134 2 88 0 114 247 1501 1368 Tobacco mosaic virus isolate Luzho p126 gene, partial cds blastn 22898 237 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
4756214 4756214 PRJNA946307_P_NODE_74884_length_197_cov_4.763514_g74010_i0 PRJNA946307 74884 197 4.763514 9.38412258 Erysimum leaf mottle virus 2931417 Viruses Viruses 128 2.76e-25   NTclustered gi|2217133995|gb|OL420671.1| 2931417 g74010 i0 89.899 1.3756345177665 99 10 92 0 99 197 5319 5221 Erysimum leaf mottle virus isolate DSMZ PV-1249 blastn 271 128 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Tymovirus Erysimum leaf mottle virus
6029662 6029662 PRJNA946307_P_NODE_155225_length_163_cov_3.859649_g154351_i0 PRJNA946307 155225 163 3.859649 6.29122787 Hainan alphaflexivirus 2 2824425 Viruses Viruses 110 7.95e-20   NTclustered gi|2075444288|gb|MW897284.1| 2824425 g154351 i0 88.172 3.14110429447853 93 10 56 1 65 156 4163 4255 MAG: Hainan alphaflexivirus 2 isolate R87-k141_314575 replicase gene, partial cds; and NTP-binding helicase and hypothetical protein genes, complete cds blastn 512 110 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae   Hainan alphaflexivirus 2
6029906 6029906 PRJNA946307_P_NODE_169465_length_156_cov_3.560748_g168591_i0 PRJNA946307 169465 156 3.560748 5.55476688 Potexvirus pepini 3433856 Viruses Viruses 263 5.449999999999999e-66   NTclustered gi|1839430095|gb|MK860504.1| 112229 g168591 i0 100 91.025641025641 142 0 91 0 15 156 1434 1575 Pepino mosaic virus isolate MU14_2.18b_Vl TGB1 protein, TGB2 protein, TGB3 protein, and CP protein genes, complete cds blastn 14200 263 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
6364814 6364814 PRJNA946307_P_NODE_61185_length_205_cov_1.794872_g60311_i0 PRJNA946307 61185 205 1.794872 3.6794876 Potexvirus 12176 Viruses Viruses 344 2.64e-90   NTclustered gi|1674914793|gb|MK391570.1| 112229 g60311 i0 98.958 93.6243902439024 192 2 94 0 3 194 4382 4191 Pepino mosaic virus isolate PMV/DIA131, complete genome blastn 19193 344 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
9853651 9853651 PRJNA946307_P_NODE_107248_length_181_cov_1.469697_g106374_i0 PRJNA946307 107248 181 1.469697 2.66015157 Cucumovirus CMV 3428131 Viruses Viruses 267 5.04e-67   NTclustered gi|1755145024|gb|MH709142.2| 12305 g106374 i0 95.238 92.3977900552486 168 8 93 0 14 181 2353 2520 Cucumber mosaic virus isolate 20 segment RNA1, complete sequence blastn 16724 267 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Cucumovirus Cucumovirus CMV
9856086 9856086 PRJNA946307_P_NODE_88548_length_189_cov_2.335714_g87674_i0 PRJNA946307 88548 189 2.335714 4.41449946 Bromovirus BMV 3427622 Viruses Viruses 305 1.13e-78   NTclustered gi|2239525971|gb|MW568013.1| 12302 g87674 i0 98.286 31.4338624338624 175 1 92 1 3 175 221 47 Brome mosaic virus isolate BMV-PK RdRp polymerase gene, complete cds blastn 5941 305 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV
11464507 11464507 PRJNA946307_P_NODE_5869_length_592_cov_3.530387_g5132_i0 PRJNA946307 5869 592 3.530387 20.89989104 Ilarvirus 12316 Viruses Viruses 499 1.74e-136   NTclustered gi|2476055822|gb|OP561324.1| 2676886 g5132 i0 98.925 33.6638513513514 279 3 93 0 5 283 1211 933 MAG: Solanum nigrum ilarvirus 1 isolate IN15LIB15-ds180 segment RNA3, complete sequence blastn 19929 499 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Ilarvirus Ilarvirus SnIV1
13679317 13679317 PRJNA946307_P_NODE_105331_length_182_cov_1.345865_g104457_i0 PRJNA946307 105331 182 1.345865 2.4494743 Ripodos virus 3130450 Viruses Viruses 73.1 1.19e-8   NTclustered gi|2717319779|gb|PP172752.1| 3130450 g104457 i0 93.878 22.1758241758242 49 2 26 1 1 48 2352 2304 MAG: Ripodos virus isolate KCAP1_k141_482780 genomic sequence blastn 4036 73.1 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae   Ripodos virus
13679332 13679332 PRJNA946307_P_NODE_10591_length_412_cov_2.079890_g9738_i0 PRJNA946307 10591 412 2.07989 8.5691468 Tobamovirus tabaci 3432891 Viruses Viruses 713 0   NTclustered gi|388240137|emb|HE818413.1| 12242 g9738 i0 99.241 95.8543689320388 395 3 96 0 15 409 4001 4395 Tobacco mosaic virus isolate Bijie, complete genome blastn 39492 713 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
13680516 13680516 PRJNA946307_P_NODE_1971_length_1023_cov_2.490760_g1577_i0 PRJNA946307 1971 1023 2.49076 25.4804748 Tobamovirus tabaci 3432891 Viruses Viruses 1858 0   NTclustered gi|388240245|emb|HE818440.1| 12242 g1577 i0 99.901 98.6422287390029 1009 1 99 0 15 1023 4629 5637 Tobacco mosaic virus isolate Shaoxing, complete genome blastn 100911 1858 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
13681409 13681409 PRJNA946307_P_NODE_69011_length_199_cov_3.513333_g68137_i0 PRJNA946307 69011 199 3.513333 6.99153267 Hainan alphaflexivirus 2 2824425 Viruses Viruses 150 5.95e-32   NTclustered gi|2075444288|gb|MW897284.1| 2824425 g68137 i0 94.792 153.43216080402 96 5 48 0 6 101 4268 4173 MAG: Hainan alphaflexivirus 2 isolate R87-k141_314575 replicase gene, partial cds; and NTP-binding helicase and hypothetical protein genes, complete cds blastn 30533 150 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae   Hainan alphaflexivirus 2
14013815 14013815 PRJNA946307_P_NODE_117791_length_176_cov_1.771654_g116917_i0 PRJNA946307 117791 176 1.771654 3.11811104 root 1 Root_unresolved Root_unresolved 294 2.23e-75   NTclustered gi|2085707074|gb|MW521351.1| 12242 g116917 i0 97.661 97.1477272727273 171 4 97 0 6 176 454 284 Tobacco mosaic virus isolate Luzho p126 gene, partial cds blastn 17098 294 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
14014411 14014411 PRJNA946307_P_NODE_31431_length_233_cov_1.097826_g30557_i0 PRJNA946307 31431 233 1.097826 2.55793458 Tobamovirus 12234 Viruses Viruses 409 1.07e-109   NTclustered gi|388240145|emb|HE818415.1| 12242 g30557 i0 98.283 99.4334763948498 233 4 100 0 1 233 1189 1421 Tobacco mosaic virus isolate Binchuan, complete genome blastn 23168 409 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
15288188 15288188 PRJNA946307_P_NODE_167032_length_158_cov_5.917431_g166158_i0 PRJNA946307 167032 158 5.917431 9.34954098 Tobamovirus 12234 Viruses Viruses 267 4.2799999999999996e-67   NTclustered gi|1559989139|gb|MK273185.1| 1761477 g166158 i0 100 91.1392405063291 144 0 91 0 1 144 537 394 Tomato brown rugose fruit virus isolate TAN3 RNA-dependent RNA polymerase (RdRp) gene, partial cds blastn 14400 267 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
16229513 16229513 PRJNA946307_P_NODE_165573_length_160_cov_2.486486_g164699_i0 PRJNA946307 165573 160 2.486486 3.9783776 Ilarvirus SnIV1 3429937 Viruses Viruses 254 3.39e-63   NTclustered gi|2476055828|gb|OP561326.1| 2676886 g164699 i0 98.601 26.66875 143 2 89 0 15 157 1397 1539 MAG: Solanum nigrum ilarvirus 1 isolate GPGV2021-TT2020-31 segment RNA1, complete sequence blastn 4267 254 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Ilarvirus Ilarvirus SnIV1
17504969 17504969 PRJNA946307_P_NODE_171034_length_155_cov_2.641509_g170160_i0 PRJNA946307 171034 155 2.641509 4.09433895 Wuhan aphid virus 2 1746068 Viruses Viruses 176 7.25e-40   NTclustered gi|952002246|ref|NC_028387.1| 1746068 g170160 i0 89.286 3.61290322580645 140 15 90 0 2 141 1543 1404 Wuhan aphid virus 2 strain WHYC-2 segment 4, complete sequence blastn 560 176 1 Viruses Jingmenvirus group Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae   Wuhan aphid virus 2
17505788 17505788 PRJNA946307_P_NODE_58974_length_209_cov_2.968750_g58100_i0 PRJNA946307 58974 209 2.96875 6.2046875 Ilarvirus TIV1 3429941 Viruses Viruses 202 1.7199999999999998e-47   NTclustered gi|2273760869|gb|OL472058.1| 2950890 g58100 i0 89.634 1.19138755980861 164 8 94 1 46 209 2766 2612 MAG: Tomato ilarvirus 1 isolate MIR20AT segment RNA2, complete sequence blastn 249 202 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Ilarvirus Ilarvirus TIV1
17506056 17506056 PRJNA946307_P_NODE_74774_length_197_cov_5.547297_g73900_i0 PRJNA946307 74774 197 5.547297 10.92817509 Aureusvirus cucumis 3047779 Viruses Viruses 182 2.09e-41   NTclustered gi|641481251|ref|NC_007816.2| 165432 g73900 i0 100 5.14213197969543 98 0 92 0 3 100 2972 2875 Cucumber leaf spot virus, complete genome blastn 1013 182 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Aureusvirus Aureusvirus cucumis
21328044 21328044 PRJNA946307_P_NODE_12397_length_374_cov_3.120000_g11532_i0 PRJNA946307 12397 374 3.12 11.6688 Tobamovirus fructirugosum 3432872 Viruses Viruses 656 0   NTclustered gi|2837380407|gb|PP099942.1| 1761477 g11532 i0 99.721 95.7219251336898 358 1 96 0 15 372 5248 5605 Tomato brown rugose fruit virus isolate NPPO-NL 41927291, complete genome blastn 35800 656 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
21328948 21328948 PRJNA946307_P_NODE_20757_length_281_cov_1.021552_g19884_i0 PRJNA946307 20757 281 1.021552 2.87056112 Tobamovirus tabaci 3432891 Viruses Viruses 477 3.6099999999999986e-130   NTclustered gi|15149317|gb|AF395128.1|AF395128 12242 g19884 i0 99.242 93.7508896797153 264 2 94 0 4 267 6304 6041 Tobacco mosaic virus isolate TMV-017, complete genome blastn 26344 477 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
21662532 21662532 PRJNA946307_P_NODE_166337_length_159_cov_2.972727_g165463_i0 PRJNA946307 166337 159 2.972727 4.72663593 Potexvirus 12176 Viruses Viruses 270 3.3399999999999992e-68   NTclustered gi|2204333791|dbj|LC654699.2| 1176736 g165463 i0 100 8.10691823899371 146 0 92 0 1 146 1214 1069 Pitaya virus X YA genomic RNA, complete genome blastn 1289 270 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecspitayae
22602914 22602914 PRJNA946307_P_NODE_118218_length_176_cov_1.519685_g117344_i0 PRJNA946307 118218 176 1.519685 2.6746456 Tobamovirus capsici 3432865 Viruses Viruses 267 4.8699999999999996e-67   NTclustered gi|499141708|gb|KC571249.1| 12239 g117344 i0 93.889 94.0227272727273 180 5 100 3 1 176 545 368 Pepper mild mottle virus isolate Guizhou movement protein (MP) gene, complete cds blastn 16548 267 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus capsici
22938797 22938797 PRJNA946307_P_NODE_95818_length_186_cov_1.503650_g94944_i0 PRJNA946307 95818 186 1.50365 2.796789 Potexvirus 12176 Viruses Viruses 311 2.38e-80   NTclustered gi|2520252268|gb|OQ993360.1| 112229 g94944 i0 99.415 54.241935483871 171 1 92 0 15 185 1111 941 Pepino mosaic virus isolate DSMZ PV-0632, complete genome blastn 10089 311 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
23879484 23879484 PRJNA946307_P_NODE_22919_length_268_cov_1.753425_g22045_i0 PRJNA946307 22919 268 1.753425 4.699179 Ilarvirus SnIV1 3429937 Viruses Viruses 414 2.72e-111   NTclustered gi|2484149186|tpg|BK061648.1| 2676886 g22045 i0 96.774 32.2835820895522 248 8 93 0 15 262 1979 2226 TPA_asm: Solanum nigrum ilarvirus 1 isolate SRR949232 segment RNA3 movement protein (3a) and coat protein (3b) genes, complete cds blastn 8652 414 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Ilarvirus Ilarvirus SnIV1
24211696 24211696 PRJNA946307_P_NODE_145259_length_166_cov_0.888889_g144385_i0 PRJNA946307 145259 166 0.888889 1.47555574 Tobamovirus 12234 Viruses Viruses 265 1.64e-66   NTclustered gi|388240245|emb|HE818440.1| 12242 g144385 i0 98.026 91.5301204819277 152 3 92 0 1 152 2700 2549 Tobacco mosaic virus isolate Shaoxing, complete genome blastn 15194 265 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
26835677 26835677 PRJNA946307_P_NODE_16201_length_320_cov_3.228782_g15330_i0 PRJNA946307 16201 320 3.228782 10.3321024 Qianjiang tombus-like virus 257 3347932 Viruses Viruses 133 7.57e-34   NR XHA87009.1 3347932 g15330 i0 59.8 0.95625 102 41 95.6 0 306 1 121 222 XHA87009.1 MAG: putative RNA-dependent RNA polymerase [Qianjiang tombus-like virus 257] diamond 306 133 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Qianjiang tombus-like virus 257
29015209 29015209 PRJNA946307_P_NODE_105128_length_182_cov_1.451128_g104254_i0 PRJNA946307 105128 182 1.451128 2.64105296 Wuhan cricket virus 1746070 Viruses Viruses 64.3 4.02e-10   NR YP_009179400.1 1746070 g104254 i0 70.6 0.56043956043956 34 10 56 0 13 114 784 817 YP_009179400.1 NS3-like protein [Wuhan cricket virus] diamond 102 64.3 1 Viruses Jingmenvirus group Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae   Wuhan cricket virus
29267312 29267312 PRJNA946307_P_NODE_131089_length_170_cov_2.330579_g130215_i0 PRJNA946307 131089 170 2.330579 3.9619843 Tombusviridae sp. 2583950 Viruses Viruses 75.5 2.57e-14   NR USC30167.1 2583950 g130215 i0 67.3 0.917647058823529 52 17 91.8 0 157 2 201 252 USC30167.1 MAG: putative RNA dependent RNA polymerase, partial [Tombusviridae sp.] diamond 156 75.5 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Tombusviridae sp.
31257736 31257736 PRJNA946307_P_NODE_84815_length_191_cov_2.014085_g83941_i0 PRJNA946307 84815 191 2.014085 3.84690235 Chrocowirk virus 3129570 Viruses Viruses 89 4.25e-19   NR WZH58535.1 3129570 g83941 i0 74.5 0.863874345549738 55 14 86.4 0 178 14 117 171 WZH58535.1 MAG: RNA-dependent RNA polymerase, partial [Chrocowirk virus] diamond 165 89 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Chrocowirk virus
32238652 32238652 PRJNA946307_P_NODE_21798_length_274_cov_3.177778_g20925_i0 PRJNA946307 21798 274 3.177778 8.70711172 Chrocowirk virus 3129570 Viruses Viruses 58.9 1e-7   NR WZH58535.1 3129570 g20925 i0 62.5 0.437956204379562 40 15 43.8 0 127 8 269 308 WZH58535.1 MAG: RNA-dependent RNA polymerase, partial [Chrocowirk virus] diamond 120 58.9 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Chrocowirk virus
32775099 32775099 PRJNA946307_P_NODE_109920_length_179_cov_7.046154_g109046_i0 PRJNA946307 109920 179 7.046154 12.61261566 Erysiphe necator associated virga-like virus 6 2743133 Viruses Viruses 42.7 0.0161   NR QKN22665.1 2743133 g109046 i0 50 0.737430167597765 44 22 73.7 0 15 146 126 169 QKN22665.1 RNA-dependent RNA polymerase [Erysiphe necator associated virga-like virus 6] diamond 132 42.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Erysiphe necator associated virga-like virus 6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;