RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA946307" and tax_phylum = "Candidatus Lloydiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Lloydiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA946307 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27000278 27000278 PRJNA946307_P_NODE_66022_length_199_cov_6.080000_g65148_i0 PRJNA946307 66022 199 6.08 12.0992 Bacteria 2 Bacteria Bacteria 56.6 2.55e-7   NR OGZ05875.1 1798658 g65148 i0 71 1.40201005025126 31 9 46.7 0 193 101 162 192 OGZ05875.1 MAG: hypothetical protein A2845_03670 [Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_01_FULL_49_22] diamond 279 57 0.992982456140351 Bacteria Bacteria candidate phyla   Candidatus Lloydiibacteriota         Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_01_FULL_49_22
31099523 31099523 PRJNA946307_P_NODE_173615_length_152_cov_4.116505_g172741_i0 PRJNA946307 173615 152 4.116505 6.2570876 Candidatus Lloydbacteria bacterium RIFOXYC12_FULL_46_25 1798670 Bacteria Bacteria 57.4 7.19e-8   NR OGZ18272.1 1798670 g172741 i0 58.7 1.79605263157895 46 19 90.8 0 151 14 242 287 OGZ18272.1 MAG: hypothetical protein A2494_01635 [Candidatus Lloydbacteria bacterium RIFOXYC12_FULL_46_25] diamond 273 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Lloydiibacteriota         Candidatus Lloydbacteria bacterium RIFOXYC12_FULL_46_25

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;