RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA946307" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 8 ✖

bioproject 1

  • PRJNA946307 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6364322 6364322 PRJNA946307_P_NODE_168645_length_157_cov_2.731481_g167771_i0 PRJNA946307 168645 157 2.731481 4.28842517 Viruses 10239 Viruses Viruses 248 1.54e-61   NTclustered gi|1675876934|gb|MK032699.1| 2202565 g167771 i0 97.902 12.7834394904459 143 3 91 0 15 157 1991 2133 MAG: Genomoviridae sp. isolate ctfi75, complete genome blastn 2007 248 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
8912894 8912894 PRJNA946307_P_NODE_149467_length_165_cov_0.896552_g148593_i0 PRJNA946307 149467 165 0.896552 1.4793108 Betapapillomavirus 333922 Viruses Viruses 287 3.47e-73   NTclustered gi|60294|emb|X52061.1| 10566 g148593 i0 98.193 3.96969696969697 166 0 100 2 1 165 584 421 Human papillomavirus (HPV) long control region blastn 655 287 1 Viruses Human papillomavirus types Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Human papillomavirus
11129275 11129275 PRJNA946307_P_NODE_106889_length_181_cov_1.545455_g106015_i0 PRJNA946307 106889 181 1.545455 2.79727355 Ciconia boyciana parvoviridae sp. 2794472 Viruses Viruses 82.4 1.96e-11   NTclustered gi|2045611283|gb|MW046548.1| 2794472 g106015 i0 100 0.243093922651934 44 0 24 0 137 180 2809 2766 MAG: Ciconia boyciana parvoviridae sp. isolate whs72par019 genomic sequence, sequence blastn 44 82.4 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Ciconia boyciana parvoviridae sp.
12404770 12404770 PRJNA946307_P_NODE_107950_length_180_cov_3.992366_g107076_i0 PRJNA946307 107950 180 3.992366 7.1862588 Gammapapillomavirus 16 1513261 Viruses Viruses 265 1.8e-66   NTclustered gi|389656416|ref|NC_017995.1| 1070410 g107076 i0 98.026 1.52777777777778 152 3 84 0 15 166 3382 3533 Human papillomavirus type 137, complete genome blastn 275 265 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Gammapapillomavirus Gammapapillomavirus 16
17837920 17837920 PRJNA946307_P_NODE_34234_length_224_cov_4.468571_g33360_i0 PRJNA946307 34234 224 4.468571 10.00959904 Viruses 10239 Viruses Viruses 200 6.72e-47   NTclustered gi|1675876934|gb|MK032699.1| 2202565 g33360 i0 99.099 2.48214285714286 111 1 88 0 2 112 1889 1779 MAG: Genomoviridae sp. isolate ctfi75, complete genome blastn 556 200 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
18779444 18779444 PRJNA946307_P_NODE_65875_length_199_cov_6.793333_g65001_i0 PRJNA946307 65875 199 6.793333 13.51873267 Genomoviridae sp. 2202565 Viruses Viruses 187 4.54e-43   NTclustered gi|2164969938|gb|MN765193.1| 2202565 g65001 i0 100 7.04020100502513 101 0 51 0 1 101 431 331 MAG: Genomoviridae sp. isolate SAfia-016D, complete genome blastn 1401 187 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
27151359 27151359 PRJNA946307_P_NODE_102962_length_183_cov_1.425373_g102088_i0 PRJNA946307 102962 183 1.425373 2.60843259 Arizlama virus 2859451 Viruses Viruses 65.1 1.22e-10   NR QXP07721.1 2859451 g102088 i0 63.3 1.49180327868852 49 14 73.8 1 151 17 146 194 QXP07721.1 MAG: putative capsid protein [Arizlama virus] diamond 273 65.1 1 Viruses   Shotokuvirae Cressdnaviricota         Arizlama virus
31225955 31225955 PRJNA946307_P_NODE_172535_length_153_cov_4.375000_g171661_i0 PRJNA946307 172535 153 4.375 6.69375 Wigfec virus K19_645 2986016 Viruses Viruses 43.5 0.00535   NR UYD39132.1 2986016 g171661 i0 46.3 1.31372549019608 41 22 80.4 0 128 6 61 101 UYD39132.1 MAG: capsid protein [Wigfec virus K19_645] diamond 201 43.5 1 Viruses   Shotokuvirae Cressdnaviricota         Wigfec virus K19_645

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;