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contig_metadata

24 rows where bioproject = "PRJNA946307" and tax_kingdom = "Pararnavirae"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 24 ✖

bioproject 1

  • PRJNA946307 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3477818 3477818 PRJNA946307_P_NODE_31483_length_232_cov_6.453552_g30609_i0 PRJNA946307 31483 232 6.453552 14.97224064 Pinus nigra virus 1 2267679 Viruses Viruses 158 4.27e-34   NTclustered gi|1421686372|gb|MH551473.1| 2267679 g30609 i0 94.175 2.625 103 6 88 0 116 218 3831 3729 Pinus nigra virus 1 isolate S1, complete genome blastn 609 158 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
4754810 4754810 PRJNA946307_P_NODE_151804_length_164_cov_2.260870_g150930_i0 PRJNA946307 151804 164 2.26087 3.7078268 Pinus nigra virus 1 2267679 Viruses Viruses 174 2.8e-39   NTclustered gi|1421686372|gb|MH551473.1| 2267679 g150930 i0 87.582 2.79878048780488 153 16 91 2 15 164 137 289 Pinus nigra virus 1 isolate S1, complete genome blastn 459 174 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
8912597 8912597 PRJNA946307_P_NODE_111887_length_179_cov_1.307692_g111013_i0 PRJNA946307 111887 179 1.307692 2.34076868 Gammaretrovirus 153135 Viruses Viruses 268 1.3799999999999999e-67   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g111013 i0 98.675 2.53072625698324 151 2 84 0 15 165 4593 4443 Moloney murine leukemia virus, complete genome blastn 453 268 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
12405327 12405327 PRJNA946307_P_NODE_139230_length_167_cov_2.432203_g138356_i0 PRJNA946307 139230 167 2.432203 4.06177901 Pinus nigra virus 1 2267679 Viruses Viruses 158 2.89e-34   NTclustered gi|1421686372|gb|MH551473.1| 2267679 g138356 i0 88.976 2.2814371257485 127 14 76 0 37 163 830 956 Pinus nigra virus 1 isolate S1, complete genome blastn 381 158 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
20054182 20054182 PRJNA946307_P_NODE_57316_length_210_cov_2.720497_g56442_i0 PRJNA946307 57316 210 2.720497 5.7130437 Pinus nigra virus 1 2267679 Viruses Viruses 67.6 6.58e-7   NTclustered gi|1421686372|gb|MH551473.1| 2267679 g56442 i0 97.436 0.557142857142857 39 1 19 0 172 210 6880 6918 Pinus nigra virus 1 isolate S1, complete genome blastn 117 67.6 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
21328628 21328628 PRJNA946307_P_NODE_159977_length_162_cov_2.530973_g159103_i0 PRJNA946307 159977 162 2.530973 4.10017626 Pinus nigra virus 1 2267679 Viruses Viruses 207 2.72e-49   NTclustered gi|1571847622|ref|NC_040841.1| 2267679 g159103 i0 91.892 2.7283950617284 148 12 91 0 15 162 577 724 Pinus nigra virus 1 isolate B2, complete genome blastn 442 207 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
22603391 22603391 PRJNA946307_P_NODE_145958_length_166_cov_0.871795_g145084_i0 PRJNA946307 145958 166 0.871795 1.4471797 Pinus nigra virus 1 2267679 Viruses Viruses 187 3.65e-43   NTclustered gi|1421686370|gb|MH551472.1| 2267679 g145084 i0 89.404 2.70481927710843 151 12 90 3 4 152 6060 5912 Pinus nigra virus 1 isolate BM, complete genome blastn 449 187 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
23880411 23880411 PRJNA946307_P_NODE_77059_length_196_cov_3.217687_g76185_i0 PRJNA946307 77059 196 3.217687 6.30666652 Pinus nigra virus 1 2267679 Viruses Viruses 121 4.579999999999999e-23   NTclustered gi|1421686372|gb|MH551473.1| 2267679 g76185 i0 88.119 1.54591836734694 101 12 52 0 96 196 2320 2420 Pinus nigra virus 1 isolate S1, complete genome blastn 303 121 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
25153242 25153242 PRJNA946307_P_NODE_33800_length_225_cov_8.727273_g32926_i0 PRJNA946307 33800 225 8.727273 19.63636425 Pinus nigra virus 1 2267679 Viruses Viruses 222 1.44e-53   NTclustered gi|1571847622|ref|NC_040841.1| 2267679 g32926 i0 91.358 2.16 162 14 72 0 19 180 6530 6369 Pinus nigra virus 1 isolate B2, complete genome blastn 486 222 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
26676959 26676959 PRJNA946307_P_NODE_72321_length_198_cov_5.402685_g71447_i0 PRJNA946307 72321 198 5.402685 10.6973163 Pinus nigra virus 1 2267679 Viruses Viruses 63.5 9.4e-10   NR AXB54821.1 2267679 g71447 i0 90.6 0.484848484848485 32 3 48.5 0 9 104 193 224 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 96 63.5 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
26835709 26835709 PRJNA946307_P_NODE_50001_length_210_cov_3.478261_g49127_i0 PRJNA946307 50001 210 3.478261 7.3043481 Pinus nigra virus 1 2267679 Viruses Viruses 67 6.69e-11   NR AXB54821.1 2267679 g49127 i0 90.9 0.471428571428571 33 3 47.1 0 100 2 1184 1216 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 99 67 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
27120013 27120013 PRJNA946307_P_NODE_83962_length_191_cov_3.809859_g83088_i0 PRJNA946307 83962 191 3.809859 7.27683069 Pinus nigra virus 1 2267679 Viruses Viruses 55.1 8.42e-7   NR AXB54821.1 2267679 g83088 i0 59.6 0.738219895287958 47 17 70.7 1 2 136 1084 1130 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 141 55.1 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
28193894 28193894 PRJNA946307_P_NODE_95606_length_186_cov_1.992701_g94732_i0 PRJNA946307 95606 186 1.992701 3.70642386 Pinus nigra virus 1 2267679 Viruses Viruses 106 5.3999999999999985e-25   NR AXB54821.1 2267679 g94732 i0 86.7 0.967741935483871 60 8 96.8 0 5 184 1138 1197 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 180 106 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
28288663 28288663 PRJNA946307_P_NODE_88766_length_189_cov_2.042857_g87892_i0 PRJNA946307 88766 189 2.042857 3.86099973 Pinus nigra virus 1 2267679 Viruses Viruses 50.8 2.53e-5   NR AXB54821.1 2267679 g87892 i0 53.5 0.682539682539683 43 20 68.3 0 130 2 657 699 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 129 50.8 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
28952128 28952128 PRJNA946307_P_NODE_96248_length_186_cov_1.408759_g95374_i0 PRJNA946307 96248 186 1.408759 2.62029174 Pinus nigra virus 1 2267679 Viruses Viruses 68.6 1.42e-11   NR AXB54821.1 2267679 g95374 i0 56.9 0.935483870967742 58 24 91.9 1 16 186 754 811 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 174 68.6 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
29015287 29015287 PRJNA946307_P_NODE_29828_length_238_cov_2.000000_g28954_i0 PRJNA946307 29828 238 2 4.76 Pinus nigra virus 1 2267679 Viruses Viruses 86.3 1.72e-17   NR AXB54821.1 2267679 g28954 i0 85.7 0.617647058823529 49 7 61.8 0 91 237 935 983 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 147 86.3 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
29046649 29046649 PRJNA946307_P_NODE_17488_length_307_cov_5.988372_g16617_i0 PRJNA946307 17488 307 5.988372 18.38430204 Pinus nigra virus 1 2267679 Viruses Viruses 74.3 6.73e-13   NR AXB54821.1 2267679 g16617 i0 51.1 0.859934853420195 88 8 85 3 265 5 792 845 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 264 74.3 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
29204570 29204570 PRJNA946307_P_NODE_152129_length_164_cov_1.695652_g151255_i0 PRJNA946307 152129 164 1.695652 2.78086928 Pinus nigra virus 1 2267679 Viruses Viruses 85.9 7.99e-18   NR AXB54821.1 2267679 g151255 i0 79.2 0.878048780487805 48 10 87.8 0 149 6 363 410 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 144 85.9 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
29204640 29204640 PRJNA946307_P_NODE_70589_length_199_cov_3.113333_g69715_i0 PRJNA946307 70589 199 3.113333 6.19553267 Pinus nigra virus 1 2267679 Viruses Viruses 113 3.2400000000000006e-27   NR AXB54821.1 2267679 g69715 i0 80.9 1.0251256281407 68 6 92 1 12 194 1550 1617 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 204 113 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
29835869 29835869 PRJNA946307_P_NODE_46471_length_210_cov_4.503106_g45597_i0 PRJNA946307 46471 210 4.503106 9.4565226 Pinus nigra virus 1 2267679 Viruses Viruses 57.4 1.66e-7   NR AXB54821.1 2267679 g45597 i0 75 0.457142857142857 32 8 45.7 0 208 113 387 418 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 96 57.4 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
30562271 30562271 PRJNA946307_P_NODE_156033_length_163_cov_2.236842_g155159_i0 PRJNA946307 156033 163 2.236842 3.64605246 Pinus nigra virus 1 2267679 Viruses Viruses 92 5.46e-20   NR AXB54821.1 2267679 g155159 i0 87.8 0.901840490797546 49 6 90.2 0 147 1 1413 1461 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 147 92 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
30941861 30941861 PRJNA946307_P_NODE_151474_length_164_cov_2.495652_g150600_i0 PRJNA946307 151474 164 2.495652 4.09286928 Pinus nigra virus 1 2267679 Viruses Viruses 92.8 2.93e-20   NR AXB54821.1 2267679 g150600 i0 89.8 0.896341463414634 49 5 89.6 0 12 158 690 738 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 147 92.8 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
30941901 30941901 PRJNA946307_P_NODE_40054_length_212_cov_7.638037_g39180_i0 PRJNA946307 40054 212 7.638037 16.19263844 Pinus nigra virus 1 2267679 Viruses Viruses 54.3 2.11e-6   NR AXB54821.1 2267679 g39180 i0 73.3 0.424528301886792 30 8 42.5 0 206 117 542 571 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 90 54.3 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1
32460009 32460009 PRJNA946307_P_NODE_46419_length_210_cov_4.521739_g45545_i0 PRJNA946307 46419 210 4.521739 9.4956519 Pinus nigra virus 1 2267679 Viruses Viruses 57.4 1.66e-7   NR AXB54821.1 2267679 g45545 i0 43.9 0.942857142857143 66 33 94.3 1 209 12 754 815 AXB54821.1 polyprotein [Pinus nigra virus 1] diamond 198 57.4 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae   Pinus nigra virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;