RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA946307" and tax_kingdom = "Loebvirae"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 2 ✖

bioproject 1

  • PRJNA946307 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18778350 18778350 PRJNA946307_P_NODE_162155_length_162_cov_0.902655_g161281_i0 PRJNA946307 162155 162 0.902655 1.4623011 Inoviridae sp. 2219103 Viruses Viruses 148 1.6699999999999999e-31   NTclustered gi|2906156750|gb|PQ646969.1| 2219103 g161281 i0 86.232 0.851851851851852 138 17 85 2 17 153 7098 7234 MAG: Inoviridae sp. isolate k127_4105812 genomic sequence blastn 138 148 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
31225918 31225918 PRJNA946307_P_NODE_133975_length_169_cov_1.625000_g133101_i0 PRJNA946307 133975 169 1.625 2.74625 Inoviridae sp. 2219103 Viruses Viruses 55.8 3.28e-7   NR XOF01081.1 2219103 g133101 i0 63.9 0.63905325443787 36 13 63.9 0 40 147 104 139 XOF01081.1 MAG: hypothetical protein [Inoviridae sp.] diamond 108 55.8 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;