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contig_metadata

14 rows where bioproject = "PRJNA946307", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 14 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 14 ✖

bioproject 1

  • PRJNA946307 · 14 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26898918 26898918 PRJNA946307_P_NODE_119781_length_175_cov_2.238095_g118907_i0 PRJNA946307 119781 175 2.238095 3.91666625 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 99 2.28e-22   NR MDD5537343.1 2035772 g118907 i0 94.3 0.908571428571429 53 3 90.9 0 15 173 78 130 MDD5537343.1 CDC48 family AAA ATPase [Candidatus Omnitrophota bacterium] diamond 159 99 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27183252 27183252 PRJNA946307_P_NODE_101482_length_183_cov_3.261194_g100608_i0 PRJNA946307 101482 183 3.261194 5.96798502 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 90.9 2.47e-22   NR MBU1006958.1 2035772 g100608 i0 87 0.754098360655738 46 6 75.4 0 169 32 30 75 MBU1006958.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 138 90.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27569180 27569180 PRJNA946307_P_NODE_135764_length_168_cov_3.882353_g134890_i0 PRJNA946307 135764 168 3.882353 6.52235304 Pseudomonadati 3379134 Bacteria Bacteria 45.4 2.83e-4   NR OGW71308.1 1801814 g134890 i0 50 4.55357142857143 32 16 57.1 0 156 61 22 53 OGW71308.1 MAG: molybdopterin synthase sulfur carrier subunit [Omnitrophica bacterium GWA2_41_15] diamond 765 45.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium GWA2_41_15
27625928 27625928 PRJNA946307_P_NODE_73304_length_198_cov_3.550336_g72430_i0 PRJNA946307 73304 198 3.550336 7.02966528 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 67.8 2.05e-11   NR MDD2866875.1 2035772 g72430 i0 36.1 3.78787878787879 108 24 95.5 1 9 197 67 174 MDD2866875.1 PilT/PilU family type 4a pilus ATPase [Candidatus Omnitrophota bacterium] diamond 750 67.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27720936 27720936 PRJNA946307_P_NODE_44944_length_210_cov_5.751553_g44070_i0 PRJNA946307 44944 210 5.751553 12.0782613 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62.8 1.39e-9   NR MCM8780496.1 2035772 g44070 i0 93.9 4.67142857142857 33 2 47.1 0 100 2 192 224 MCM8780496.1 acetyl-CoA carboxylase, carboxyltransferase subunit beta [Candidatus Omnitrophota bacterium] diamond 981 62.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28926902 28926902 PRJNA946307_P_NODE_172408_length_153_cov_7.115385_g171534_i0 PRJNA946307 172408 153 7.115385 10.88653905 root 1 Root_unresolved Root_unresolved 55.1 4.93e-7   NR MCK9603157.1 2035772 g171534 i0 68.2 2.58823529411765 44 14 86.3 0 135 4 206 249 MCK9603157.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 396 55.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29022006 29022006 PRJNA946307_P_NODE_54148_length_210_cov_2.913043_g53274_i0 PRJNA946307 54148 210 2.913043 6.1173903 Pseudomonadati 3379134 Bacteria Bacteria 52.4 9.7e-6   NR MBF0489250.1 2035772 g53274 i0 92.9 16.7714285714286 28 2 40 0 195 112 382 409 MBF0489250.1 efflux RND transporter permease subunit [Candidatus Omnitrophota bacterium] diamond 3522 52.8 0.992424242424242 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29551486 29551486 PRJNA946307_P_NODE_106530_length_181_cov_2.159091_g105656_i0 PRJNA946307 106530 181 2.159091 3.90795471 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 72.8 4.19e-13   NR MFH1202244.1 2035772 g105656 i0 59.6 0.94475138121547 57 23 94.5 0 172 2 625 681 MFH1202244.1 RHS repeat-associated core domain-containing protein [Candidatus Omnitrophota bacterium] diamond 171 72.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29962304 29962304 PRJNA946307_P_NODE_70251_length_199_cov_3.120000_g69377_i0 PRJNA946307 70251 199 3.12 6.2088 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.1 0.00931   NR HXV18448.1 2035772 g69377 i0 67.7 0.467336683417085 31 10 46.7 0 197 105 76 106 HXV18448.1 NADH-quinone oxidoreductase subunit J [Candidatus Omnitrophota bacterium] diamond 93 43.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30436461 30436461 PRJNA946307_P_NODE_168433_length_157_cov_3.472222_g167559_i0 PRJNA946307 168433 157 3.472222 5.45138854 Omnitrophica bacterium RIFCSPHIGHO2_ 2035772 Bacteria Bacteria 56.6 1.28e-7   NR OGW83093.1 1801823 g167559 i0 56.1 0.78343949044586 41 18 78.3 0 138 16 176 216 OGW83093.1 MAG: hypothetical protein A3C47_04720 [Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18] diamond 123 56.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium RIFCSPHIGHO2_02_FULL_51_18
30688857 30688857 PRJNA946307_P_NODE_86013_length_190_cov_2.680851_g85139_i0 PRJNA946307 86013 190 2.680851 5.0936169 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 98.6 4.04e-22   NR MDP2652967.1 2035772 g85139 i0 72.1 2.88947368421053 61 17 96.3 0 187 5 319 379 MDP2652967.1 outer membrane protein assembly factor BamA [Candidatus Omnitrophota bacterium] diamond 549 98.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30720437 30720437 PRJNA946307_P_NODE_20454_length_283_cov_2.188034_g19581_i0 PRJNA946307 20454 283 2.188034 6.19213622 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 63.2 3.62e-9   NR MBN2452712.1 2035772 g19581 i0 49.1 0.561837455830389 53 27 56.2 0 269 111 178 230 MBN2452712.1 glycosyltransferase [Candidatus Omnitrophota bacterium] diamond 159 63.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31415835 31415835 PRJNA946307_P_NODE_106996_length_181_cov_1.477273_g106122_i0 PRJNA946307 106996 181 1.477273 2.67386413 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 72.4 1.73e-13   NR MBU1913036.1 2035772 g106122 i0 90.9 2.1878453038674 44 4 72.9 0 17 148 200 243 MBU1913036.1 twin-arginine translocase subunit TatC [Candidatus Omnitrophota bacterium] diamond 396 72.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32743849 32743849 PRJNA946307_P_NODE_137540_length_168_cov_1.546218_g136666_i0 PRJNA946307 137540 168 1.546218 2.59764624 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 92.4 3.96e-20   NR MBU4305963.1 2035772 g136666 i0 88.2 0.910714285714286 51 6 91.1 0 154 2 441 491 MBU4305963.1 type IV pilus assembly protein PilM [Candidatus Omnitrophota bacterium] diamond 153 92.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;