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contig_metadata

10 rows where bioproject = "PRJNA946307", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 2

tax_superkingdom 1

  • Eukaryota · 10 ✖

tax_clade 1

  • Metamonada · 10 ✖

bioproject 1

  • PRJNA946307 · 10 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
927885 927885 PRJNA946307_P_NODE_75961_length_197_cov_1.891892_g75087_i0 PRJNA946307 75961 197 1.891892 3.72702724 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 191 3.46e-44   NTclustered gi|303387254|gb|HM185490.1| 135588 g75087 i0 88.344 53.8832487309645 163 14 83 5 2 164 562 405 Histomonas meleagridis strain Turkey/Germany/GB 542/04 5.8 ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10615 191 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
3478443 3478443 PRJNA946307_P_NODE_6943_length_536_cov_3.843943_g6157_i0 PRJNA946307 6943 536 3.843943 20.60353448 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 645 1.8999999999999998e-180   NTclustered gi|303387254|gb|HM185490.1| 135588 g6157 i0 88.519 20.8992537313433 540 52 99 9 3 536 888 1423 Histomonas meleagridis strain Turkey/Germany/GB 542/04 5.8 ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11202 645 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
6029108 6029108 PRJNA946307_P_NODE_123885_length_173_cov_2.862903_g123011_i0 PRJNA946307 123885 173 2.862903 4.95282219 Dientamoeba fragilis 43352 Parabasalia other_Eukaryota 289 1.02e-73   NTclustered gi|52546947|gb|AY730405.1| 43352 g123011 i0 99.371 90.7861271676301 159 1 92 0 15 173 233 391 Dientamoeba fragilis small subunit ribosomal RNA gene, complete sequence blastn 15706 289 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Dientamoeba Dientamoeba fragilis
7304664 7304664 PRJNA946307_P_NODE_164586_length_161_cov_2.062500_g163712_i0 PRJNA946307 164586 161 2.0625 3.320625 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 135 1.2900000000000002e-27   NTclustered gi|303387254|gb|HM185490.1| 135588 g163712 i0 85.075 1.6583850931677 134 19 83 1 15 147 2013 1880 Histomonas meleagridis strain Turkey/Germany/GB 542/04 5.8 ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 267 135 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
8579954 8579954 PRJNA946307_P_NODE_29727_length_238_cov_3.253968_g28853_i0 PRJNA946307 29727 238 3.253968 7.74444384 Tritrichomonas augusta 5725 Parabasalia other_Eukaryota 375 1.1199999999999998e-99   NTclustered gi|2274983416|gb|OP038912.1| 5725 g28853 i0 97.285 65.655462184874 221 6 93 0 4 224 1963 1743 Tritrichomonas augusta isolate T1 large subunit ribosomal RNA gene, partial sequence blastn 15626 375 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas augusta
11129622 11129622 PRJNA946307_P_NODE_126429_length_172_cov_2.325203_g125555_i0 PRJNA946307 126429 172 2.325203 3.99934916 Hexamita inflata 28002 Fornicata other_Eukaryota 163 6.390000000000001e-36   NTclustered gi|459348792|gb|KC249997.1| 28002 g125555 i0 86.986 41.343023255814 146 17 85 2 14 159 1340 1197 Hexamita inflata 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 7111 163 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
13681569 13681569 PRJNA946307_P_NODE_7811_length_498_cov_3.082405_g7008_i0 PRJNA946307 7811 498 3.082405 15.3503769 Dientamoeba fragilis 43352 Parabasalia other_Eukaryota 887 0   NTclustered gi|2295473231|gb|OP375693.1| 43352 g7008 i0 99.793 87.6867469879518 483 1 97 0 15 497 100 582 Dientamoeba fragilis isolate B341 small subunit ribosomal RNA gene, partial sequence blastn 43668 887 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Dientamoeba Dientamoeba fragilis
16229998 16229998 PRJNA946307_P_NODE_31933_length_231_cov_3.302198_g31059_i0 PRJNA946307 31933 231 3.302198 7.62807738 Tritrichomonas augusta 5725 Parabasalia other_Eukaryota 147 9.2e-31   NTclustered gi|2274983416|gb|OP038912.1| 5725 g31059 i0 93.069 30.3160173160173 101 6 43 1 129 228 237 337 Tritrichomonas augusta isolate T1 large subunit ribosomal RNA gene, partial sequence blastn 7003 147 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas augusta
22604186 22604186 PRJNA946307_P_NODE_34658_length_223_cov_4.298851_g33784_i0 PRJNA946307 34658 223 4.298851 9.58643773 Tritrichomonas augusta 5725 Parabasalia other_Eukaryota 327 2.94e-85   NTclustered gi|2274983416|gb|OP038912.1| 5725 g33784 i0 94.762 6.60538116591928 210 11 94 0 14 223 2076 2285 Tritrichomonas augusta isolate T1 large subunit ribosomal RNA gene, partial sequence blastn 1473 327 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas augusta
23880512 23880512 PRJNA946307_P_NODE_81999_length_192_cov_3.797203_g81125_i0 PRJNA946307 81999 192 3.797203 7.29062976 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 97.1 7.53e-16   NTclustered gi|2319615589|ref|XR_007835968.1| 412133 g81125 i0 90.411 7.24479166666667 73 7 38 0 28 100 1117 1189 Trichomonas vaginalis G3 23S ribosomal RNA (TVAGG3_0033920), rRNA blastn 1391 97.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;