RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA946307", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 12 ✖

tax_clade 1

  • Bacteria candidate phyla · 12 ✖

bioproject 1

  • PRJNA946307 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22603919 22603919 PRJNA946307_P_NODE_20818_length_280_cov_3.740260_g19945_i0 PRJNA946307 20818 280 3.74026 10.472728 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 263 1.09e-65   NTclustered gi|2575803556|emb|OY729432.1| 2838779 g19945 i0 87.124 128.65 233 28 83 2 36 267 2239326 2239095 MAG: Candidatus Binatia bacterium isolate b65fbbe8-1638-4b94-9072-1473f084fbf4 genome assembly, chromosome: 1 blastn 36022 263 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27119934 27119934 PRJNA946307_P_NODE_147842_length_165_cov_1.758621_g146968_i0 PRJNA946307 147842 165 1.758621 2.90172465 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 44.3 0.00365   NR HEY1371581.1 2838779 g146968 i0 79.2 0.436363636363636 24 5 43.6 0 86 157 218 241 HEY1371581.1 hypothetical protein [Candidatus Binatia bacterium] diamond 72 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27151472 27151472 PRJNA946307_P_NODE_79722_length_194_cov_3.062069_g78848_i0 PRJNA946307 79722 194 3.062069 5.94041386 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 73.6 2.65e-13   NR HYS15338.1 2838779 g78848 i0 63.3 1.80927835051546 60 22 92.8 0 1 180 482 541 HYS15338.1 SBBP repeat-containing protein [Candidatus Binatia bacterium] diamond 351 73.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27214842 27214842 PRJNA946307_P_NODE_142262_length_167_cov_0.864407_g141388_i0 PRJNA946307 142262 167 0.864407 1.44355969 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 87.8 2.3e-21   NR MCX8072778.1 2838779 g141388 i0 84 0.898203592814371 50 8 89.8 0 5 154 11 60 MCX8072778.1 transposase [Candidatus Binatia bacterium] diamond 150 87.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27664160 27664160 PRJNA946307_P_NODE_67184_length_199_cov_4.326667_g66310_i0 PRJNA946307 67184 199 4.326667 8.61006733 Bacteria candidate phyla 1783234 Bacteria Bacteria 63.5 8.86e-10   NR HEX5020047.1 2838779 g66310 i0 79.4 2.05025125628141 34 7 51.3 0 116 15 168 201 HEX5020047.1 amidohydrolase family protein [Candidatus Binatia bacterium] diamond 408 63.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29330658 29330658 PRJNA946307_P_NODE_169149_length_157_cov_2.203704_g168275_i0 PRJNA946307 169149 157 2.203704 3.45981528 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 79.3 1.37e-15   NR HZC22068.1 2838779 g168275 i0 83 4.37579617834395 47 8 89.8 0 15 155 250 296 HZC22068.1 serine/threonine-protein kinase [Candidatus Binatia bacterium] diamond 687 79.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29621074 29621074 PRJNA946307_P_NODE_114770_length_177_cov_2.992188_g113896_i0 PRJNA946307 114770 177 2.992188 5.29617276 Pseudomonadati 3379134 Bacteria Bacteria 86.3 1.78e-18   NR HXU12022.1 2838779 g113896 i0 70.4 2.74576271186441 54 16 91.5 0 2 163 83 136 HXU12022.1 sporulation-delaying protein SdpB family protein [Candidatus Binatia bacterium] diamond 486 86.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30183398 30183398 PRJNA946307_P_NODE_37472_length_216_cov_4.682635_g36598_i0 PRJNA946307 37472 216 4.682635 10.1144916 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 43.5 0.0141   NR GIW41660.1 2838779 g36598 i0 41.3 0.638888888888889 46 27 63.9 0 74 211 1025 1070 GIW41660.1 MAG: hypothetical protein KatS3mg076_2237 [Candidatus Binatia bacterium] diamond 138 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30380033 30380033 PRJNA946307_P_NODE_149432_length_165_cov_0.896552_g148558_i0 PRJNA946307 149432 165 0.896552 1.4793108 Pseudomonadati 3379134 Bacteria Bacteria 90.9 2e-20   NR HEY7217016.1 2838779 g148558 i0 90 3.63636363636364 50 5 90.9 0 14 163 188 237 HEY7217016.1 ABC transporter ATP-binding protein [Candidatus Binatia bacterium] diamond 600 90.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31605655 31605655 PRJNA946307_P_NODE_102776_length_183_cov_1.447761_g101902_i0 PRJNA946307 102776 183 1.447761 2.64940263 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 44.3 0.00484   NR HLH75872.1 2785449 g101902 i0 45.3 1.57377049180328 53 27 86.9 1 25 183 150 200 HLH75872.1 glycosyltransferase family 9 protein [Candidatus Binataceae bacterium] diamond 288 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
31890306 31890306 PRJNA946307_P_NODE_70997_length_199_cov_3.020000_g70123_i0 PRJNA946307 70997 199 3.02 6.0098 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 49.3 1.03e-4   NR HZC24206.1 2838779 g70123 i0 66.7 0.452261306532663 30 10 45.2 0 189 100 716 745 HZC24206.1 hypothetical protein [Candidatus Binatia bacterium] diamond 90 49.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32901031 32901031 PRJNA946307_P_NODE_154820_length_164_cov_0.886957_g153946_i0 PRJNA946307 154820 164 0.886957 1.45460948 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 98.6 2.5000000000000002e-22   NR HZC24101.1 2838779 g153946 i0 98 3.65853658536585 50 1 91.5 0 151 2 58 107 HZC24101.1 efflux RND transporter permease subunit [Candidatus Binatia bacterium] diamond 600 98.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;