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contig_metadata

6 rows where bioproject = "PRJNA946307", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Altimarinota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 6 ✖

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA946307 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1260699 1260699 PRJNA946307_P_NODE_58721_length_209_cov_5.506250_g57847_i0 PRJNA946307 58721 209 5.50625 11.5080625 Bacteria 2 Bacteria Bacteria 244 2.82e-60   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g57847 i0 89.231 75.1578947368421 195 21 93 0 1 195 890815 890621 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 15708 244 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
27530986 27530986 PRJNA946307_P_NODE_49483_length_210_cov_3.490683_g48609_i0 PRJNA946307 49483 210 3.490683 7.3304343 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 44.7 0.00529   NR NVP17392.1 2044595 g48609 i0 83.3 0.342857142857143 24 4 34.3 0 133 204 980 1003 NVP17392.1 ATP-dependent helicase [Candidatus Altimarinota bacterium] diamond 72 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29078318 29078318 PRJNA946307_P_NODE_65868_length_199_cov_6.826667_g64994_i0 PRJNA946307 65868 199 6.826667 13.58506733 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 57 1.92e-7   NR MBP7773567.1 2044595 g64994 i0 90.3 0.934673366834171 31 3 46.7 0 16 108 341 371 MBP7773567.1 tyrosine--tRNA ligase [Candidatus Altimarinota bacterium] diamond 186 57 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31732101 31732101 PRJNA946307_P_NODE_86397_length_190_cov_2.028369_g85523_i0 PRJNA946307 86397 190 2.028369 3.8539011 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 56.6 2.32e-7   NR NVP17665.1 2044595 g85523 i0 96.3 0.426315789473684 27 1 42.6 0 175 95 162 188 NVP17665.1 prolyl-tRNA synthetase [Candidatus Altimarinota bacterium] diamond 81 56.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32175240 32175240 PRJNA946307_P_NODE_102158_length_183_cov_2.111940_g101284_i0 PRJNA946307 102158 183 2.11194 3.8648502 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 56.6 1.9e-7   NR MBP7806582.1 2044595 g101284 i0 89.7 0.475409836065574 29 3 47.5 0 100 14 66 94 MBP7806582.1 PHP domain-containing protein [Candidatus Altimarinota bacterium] diamond 87 56.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32838069 32838069 PRJNA946307_P_NODE_103000_length_183_cov_1.410448_g102126_i0 PRJNA946307 103000 183 1.410448 2.58111984 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 91.7 1.22e-20   NR NJM07269.1 2044595 g102126 i0 80.8 4.26229508196721 52 10 85.2 0 14 169 171 222 NJM07269.1 sortase [Candidatus Altimarinota bacterium] diamond 780 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;