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contig_metadata

11 rows where bioproject = "PRJNA944406", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 11 ✖

tax_phylum 1

  • Thermoproteota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA944406 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
924936 924936 PRJNA944406_P_NODE_7961_length_444_cov_1.628032_g7004_i0 PRJNA944406 7961 444 1.628032 7.22846208 uncultured crenarchaeote 29281 Archaea Archaea 673 0   NTclustered gi|22797874|emb|AJ496176.1| 29281 g7004 i0 94.144 48.0833333333333 444 22 100 3 1 444 5937 6376 Uncultured crenarchaeote 34 kb genomic fragment blastn 21349 673 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
1259275 1259275 PRJNA944406_P_NODE_1041_length_1323_cov_19.168000_g613_i1 PRJNA944406 1041 1323 19.168 253.59264 root 1 Root_unresolved Root_unresolved 2261 0   NTclustered gi|152014600|gb|EF690623.1| 29281 g613 i1 97.508 103.417233560091 1324 31 100 2 1 1323 1333 11 Uncultured crenarchaeote clone TX4CA_68 16S ribosomal RNA gene, partial sequence blastn 136821 2283 0.990363556723609 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
2534985 2534985 PRJNA944406_P_NODE_1022_length_1333_cov_20.376190_g613_i0 PRJNA944406 1022 1333 20.37619 271.6146127 Archaea 2157 Archaea Archaea 2261 0   NTclustered gi|1497996|gb|U62819.1|UAU62819 50857 g613 i0 97.436 103.756939234809 1326 34 99 0 1 1326 1326 1 Unidentified archaeon SCA1175 16S small subunit ribosomal RNA gene, partial sequence blastn 138308 2266 0.997793468667255 Archaea   Thermoproteati Thermoproteota         unidentified archaeon SCA1175
3475481 3475481 PRJNA944406_P_NODE_59023_length_255_cov_1.175824_g58064_i0 PRJNA944406 59023 255 1.175824 2.9983512 uncultured crenarchaeote 29281 Archaea Archaea 438 1.52e-118   NTclustered gi|42557759|emb|AJ627422.1| 29281 g58064 i0 97.647 115.137254901961 255 6 100 0 1 255 43004 43258 Uncultured crenarchaeote genomic fragment 54d9 blastn 29360 438 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
4753211 4753211 PRJNA944406_P_NODE_64_length_3061_cov_6.079652_g35_i0 PRJNA944406 64 3061 6.079652 186.09814772 uncultured crenarchaeote 29281 Archaea Archaea 3858 0   NTclustered gi|42557759|emb|AJ627422.1| 29281 g35 i0 90.379 96.1127082652728 2952 262 96 20 1 2943 40384 43322 Uncultured crenarchaeote genomic fragment 54d9 blastn 294201 3858 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
11127865 11127865 PRJNA944406_P_NODE_16369_length_319_cov_1.796748_g15410_i0 PRJNA944406 16369 319 1.796748 5.73162612 uncultured crenarchaeote 29281 Archaea Archaea 361 4.38e-95   NTclustered gi|22797874|emb|AJ496176.1| 29281 g15410 i0 87.382 36.6457680250784 317 37 99 3 1 316 7296 7610 Uncultured crenarchaeote 34 kb genomic fragment blastn 11690 361 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
25151052 25151052 PRJNA944406_P_NODE_69100_length_250_cov_0.870056_g68141_i0 PRJNA944406 69100 250 0.870056 2.17514 uncultured crenarchaeote 29281 Archaea Archaea 99 2.87e-16   NTclustered gi|22797874|emb|AJ496176.1| 29281 g68141 i0 91.549 1.568 71 6 28 0 1 71 5915 5845 Uncultured crenarchaeote 34 kb genomic fragment blastn 392 99 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
28263672 28263672 PRJNA944406_P_NODE_61946_length_252_cov_1.346369_g60987_i0 PRJNA944406 61946 252 1.346369 3.39284988 root 1 Root_unresolved Root_unresolved 50.8 1.7e-5   NR MEM0120653.1 2250277 g60987 i0 46.7 1.72619047619048 60 30 69 1 240 67 65 124 MEM0120653.1 CBS domain-containing protein [Thermoprotei archaeon] diamond 435 50.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon
29709087 29709087 PRJNA944406_P_NODE_45650_length_267_cov_1.587629_g44691_i0 PRJNA944406 45650 267 1.587629 4.23896943 Thermoproteota archaeon 2056631 Archaea Archaea 160 2.5e-45   NR MDP9197000.1 2056631 g44691 i0 92.1 1 89 7 100 0 1 267 26 114 MDP9197000.1 nickel pincer cofactor biosynthesis protein LarC [Thermoproteota archaeon] diamond 267 160 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
30151440 30151440 PRJNA944406_P_NODE_27512_length_284_cov_1.459716_g26553_i0 PRJNA944406 27512 284 1.459716 4.14559344 Thermoproteota archaeon 2056631 Archaea Archaea 45.1 0.00214   NR MDQ6862856.1 2056631 g26553 i0 90 0.422535211267606 20 2 21.1 0 283 224 91 110 MDQ6862856.1 nuclear transport factor 2 family protein [Thermoproteota archaeon] diamond 120 45.1 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
31352610 31352610 PRJNA944406_P_NODE_92096_length_245_cov_0.895349_g91137_i0 PRJNA944406 92096 245 0.895349 2.19360505 Thermoproteota archaeon 2056631 Archaea Archaea 130 4.609999999999999e-37   NR MDQ4015305.1 2056631 g91137 i0 94.9 0.722448979591837 59 3 72.2 0 2 178 64 122 MDQ4015305.1 hypothetical protein [Thermoproteota archaeon] diamond 177 130 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;