RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA944406", tax_phylum = "Thermoplasmatota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA944406 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28509744 28509744 PRJNA944406_P_NODE_88527_length_245_cov_2.459302_g87568_i0 PRJNA944406 88527 245 2.459302 6.0252899 Thermoplasmata archaeon M8B2D 1933278 Archaea Archaea 89 1.66e-18   NR PNX46061.1 1933278 g87568 i0 56.3 0.979591836734694 80 34 98 1 241 2 361 439 PNX46061.1 MAG: hypothetical protein BV456_12750, partial [Thermoplasmata archaeon M8B2D] diamond 240 89 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon M8B2D
32270121 32270121 PRJNA944406_P_NODE_95498_length_244_cov_0.900585_g94539_i0 PRJNA944406 95498 244 0.900585 2.1974274 Methanomassiliicoccales archaeon 1906667 Archaea Archaea 42 0.0314   NR MFA5314139.1 1906667 g94539 i0 24.6 0.848360655737705 69 44 75 1 49 231 17 85 MFA5314139.1 hypothetical protein [Methanomassiliicoccales archaeon] diamond 207 42 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;