RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA944406" and tax_phylum = "Tardigrada"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA944406 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
925094 925094 PRJNA944406_P_NODE_94741_length_244_cov_0.900585_g93782_i0 PRJNA944406 94741 244 0.900585 2.1974274 Milnesium berladnicorum 1767025 Tardigrada other_Eukaryota 449 6.68e-122   NTclustered gi|961441574|gb|KT951660.1| 1767025 g93782 i0 100 97.233606557377 243 0 99 0 1 243 76 318 Milnesium berladnicorum 18S ribosomal RNA gene, complete sequence blastn 23725 449 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Apochela Milnesiidae Milnesium Milnesium berladnicorum
7302706 7302706 PRJNA944406_P_NODE_50766_length_262_cov_1.920635_g49807_i0 PRJNA944406 50766 262 1.920635 5.0320637 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 110 5.18e-26   NR XP_055339303.1 2943436 g49807 i0 84.6 3.72137404580153 65 10 74.4 0 262 68 476 540 XP_055339303.1 putative aldehyde dehydrogenase family 7 member A1 homolog [Paramacrobiotus metropolitanus] diamond 975 110 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
12404210 12404210 PRJNA944406_P_NODE_9370_length_406_cov_2.186186_g8411_i0 PRJNA944406 9370 406 2.186186 8.87591516 Cryobiotus klebelsbergi 2792769 Tardigrada other_Eukaryota 710 0   NTclustered gi|961063183|gb|KT901830.1| 2792769 g8411 i0 98.272 100.977832512315 405 7 99 0 2 406 2141 1737 Hypsibius klebelsbergi voucher HD075 28S ribosomal RNA gene, partial sequence blastn 40997 710 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Cryobiotus Cryobiotus klebelsbergi
14952989 14952989 PRJNA944406_P_NODE_89472_length_245_cov_1.343023_g88513_i0 PRJNA944406 89472 245 1.343023 3.29040635 Echiniscus testudo 399800 Tardigrada other_Eukaryota 422 1.46e-113   NTclustered gi|453655126|gb|JX114862.1| 399800 g88513 i0 97.959 59.9224489795918 245 2 100 1 1 245 1251 1010 Echiniscus testudo isolate 752 28S ribosomal RNA genes, partial sequence blastn 14681 422 1 Eukaryota Opisthokonta Metazoa Tardigrada Heterotardigrada Echiniscoidea Echiniscidae Echiniscus Echiniscus testudo
22601325 22601325 PRJNA944406_P_NODE_16978_length_314_cov_4.431535_g16019_i0 PRJNA944406 16978 314 4.431535 13.9150199 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 124 6.139999999999999e-24   NTclustered gi|1045522192|dbj|AP013349.1| 947166 g16019 i0 90.426 2.4171974522293 94 9 30 0 217 310 10779 10686 Ramazzottius varieornatus DNA, Fosmid clone: GRVF-025E17, complete sequence blastn 759 124 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
22937080 22937080 PRJNA944406_P_NODE_112778_length_228_cov_2.200000_g111819_i0 PRJNA944406 112778 228 2.2 5.016 Echiniscidae 86847 Tardigrada other_Eukaryota 416 6.259999999999998e-112   NTclustered gi|453655115|gb|JX114851.1| 466947 g111819 i0 99.563 100.921052631579 229 0 100 1 1 228 1424 1196 Echiniscus blumi isolate 748 28S ribosomal RNA gene, partial sequence blastn 23010 416 1 Eukaryota Opisthokonta Metazoa Tardigrada Heterotardigrada Echiniscoidea Echiniscidae Echiniscus Echiniscus blumi
25150482 25150482 PRJNA944406_P_NODE_17160_length_313_cov_1.629167_g16201_i0 PRJNA944406 17160 313 1.629167 5.09929271 Ramazzottius oberhaeuseri 459434 Tardigrada other_Eukaryota 568 2.3499999999999998e-157   NTclustered gi|216963410|gb|FJ435727.1| 459434 g16201 i0 99.361 99.8178913738019 313 2 100 0 1 313 337 25 Ramazzottius oberhaeuseri isolate Tar400 18S ribosomal RNA gene, partial sequence blastn 31243 568 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius oberhaeuseri
27246588 27246588 PRJNA944406_P_NODE_75403_length_248_cov_4.200000_g74444_i0 PRJNA944406 75403 248 4.2 10.416 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 58.5 1.08e-7   NR GAV05910.1 947166 g74444 i0 43 2.49193548387097 79 43 95.6 2 3 239 214 290 GAV05910.1 hypothetical protein RvY_15966 [Ramazzottius varieornatus] diamond 618 58.5 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
29172886 29172886 PRJNA944406_P_NODE_100689_length_243_cov_0.905882_g99730_i0 PRJNA944406 100689 243 0.905882 2.20129326 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 60.8 1.55e-8   NR XP_055342170.1 2943436 g99730 i0 44.6 2.16049382716049 56 28 65.4 1 171 13 74 129 XP_055342170.1 histone-lysine N-methyltransferase SMYD3-like isoform X3 [Paramacrobiotus metropolitanus] diamond 525 60.8 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
30593894 30593894 PRJNA944406_P_NODE_14833_length_333_cov_1.146154_g13874_i0 PRJNA944406 14833 333 1.146154 3.81669282 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 89 1.47e-19   NR XP_055351044.1 2943436 g13874 i0 52.3 0.774774774774775 86 41 77.5 0 2 259 89 174 XP_055351044.1 60S ribosomal protein L18a-like [Paramacrobiotus metropolitanus] diamond 258 89 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
30593906 30593906 PRJNA944406_P_NODE_30033_length_282_cov_1.296651_g29074_i0 PRJNA944406 30033 282 1.296651 3.65655582 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 43.1 0.0424   NR XP_055329877.1 2943436 g29074 i0 53.5 0.457446808510638 43 19 44.7 1 157 282 263 305 XP_055329877.1 LOW QUALITY PROTEIN: piggyBac transposable element-derived protein 4-like [Paramacrobiotus metropolitanus] diamond 129 43.1 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
31542406 31542406 PRJNA944406_P_NODE_97696_length_243_cov_1.811765_g96737_i0 PRJNA944406 97696 243 1.811765 4.40258895 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 115 9.58e-28   NR GAV07723.1 947166 g96737 i0 80.2 1 81 15 98.8 1 241 2 630 710 GAV07723.1 hypothetical protein RvY_17530 [Ramazzottius varieornatus] diamond 243 115 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;